Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Usp11Q99K46 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.8□□□□□ -0.36
Usp11Q99K46 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp11Q99K46 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp11Q99K46 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.8□□□□□ -0.36
Usp11Q99K46 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp11Q99K46 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Usp11Q99K46 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp11Q99K46 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp11Q99K46 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp11Q99K46 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp11Q99K46 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.79□□□□□ -0.36
Usp11Q99K46 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp11Q99K46 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp11Q99K46 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp11Q99K46 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp11Q99K46 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.79□□□□□ -0.36
Usp11Q99K46 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Usp11Q99K46 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp11Q99K46 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Usp11Q99K46 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp11Q99K46 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp11Q99K46 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp11Q99K46 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp11Q99K46 Gm15370-201ENSMUST00000117158 253 ntBASIC12.79□□□□□ -0.36
Usp11Q99K46 Gm15198-201ENSMUST00000117283 177 ntBASIC12.79□□□□□ -0.36
Usp11Q99K46 Gm4986-201ENSMUST00000119731 549 ntBASIC12.79□□□□□ -0.36
Usp11Q99K46 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp11Q99K46 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp11Q99K46 Gm27516-201ENSMUST00000184237 98 ntBASIC12.79□□□□□ -0.36
Usp11Q99K46 Mir8109-201ENSMUST00000184375 117 ntBASIC12.79□□□□□ -0.36
Usp11Q99K46 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.79□□□□□ -0.36
Usp11Q99K46 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.79□□□□□ -0.36
Usp11Q99K46 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.79□□□□□ -0.36
Usp11Q99K46 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp11Q99K46 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.79□□□□□ -0.36
Usp11Q99K46 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.79□□□□□ -0.36
Usp11Q99K46 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp11Q99K46 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp11Q99K46 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp11Q99K46 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp11Q99K46 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp11Q99K46 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Usp11Q99K46 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp11Q99K46 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp11Q99K46 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp11Q99K46 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp11Q99K46 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp11Q99K46 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp11Q99K46 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Usp11Q99K46 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp11Q99K46 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp11Q99K46 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Usp11Q99K46 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Usp11Q99K46 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp11Q99K46 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp11Q99K46 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Usp11Q99K46 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Usp11Q99K46 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Usp11Q99K46 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp11Q99K46 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp11Q99K46 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp11Q99K46 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Usp11Q99K46 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Usp11Q99K46 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.78□□□□□ -0.36
Usp11Q99K46 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp11Q99K46 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp11Q99K46 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Usp11Q99K46 Gm12241-201ENSMUST00000118330 726 ntBASIC12.78□□□□□ -0.36
Usp11Q99K46 Gm13736-201ENSMUST00000119272 253 ntBASIC12.78□□□□□ -0.36
Usp11Q99K46 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.78□□□□□ -0.36
Usp11Q99K46 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp11Q99K46 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp11Q99K46 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp11Q99K46 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp11Q99K46 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.78□□□□□ -0.36
Usp11Q99K46 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.78□□□□□ -0.36
Usp11Q99K46 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp11Q99K46 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.78□□□□□ -0.36
Usp11Q99K46 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.78□□□□□ -0.36
Usp11Q99K46 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp11Q99K46 Gm9368-201ENSMUST00000219348 831 ntBASIC12.78□□□□□ -0.36
Usp11Q99K46 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Usp11Q99K46 Morn2-202ENSMUST00000227729 656 ntBASIC12.78□□□□□ -0.36
Usp11Q99K46 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Usp11Q99K46 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp11Q99K46 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Usp11Q99K46 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp11Q99K46 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp11Q99K46 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp11Q99K46 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp11Q99K46 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp11Q99K46 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp11Q99K46 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp11Q99K46 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp11Q99K46 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp11Q99K46 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Usp11Q99K46 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Usp11Q99K46 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Usp11Q99K46 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms