Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Gm25890-201ENSMUST00000177643 165 ntBASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Gm22614-201ENSMUST00000178300 165 ntBASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Gm8885-201ENSMUST00000189382 598 ntBASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Gm38317-201ENSMUST00000195564 343 ntBASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Gm42937-201ENSMUST00000197360 752 ntBASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Gm22042-201ENSMUST00000082989 165 ntBASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Gm26232-201ENSMUST00000083360 166 ntBASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Gm26110-201ENSMUST00000083971 165 ntBASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdha3Q91Y16 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdha3Q91Y16 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdha3Q91Y16 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Pcdha3Q91Y16 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Pcdha3Q91Y16 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdha3Q91Y16 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdha3Q91Y16 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdha3Q91Y16 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Pcdha3Q91Y16 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdha3Q91Y16 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Pcdha3Q91Y16 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdha3Q91Y16 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Pcdha3Q91Y16 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdha3Q91Y16 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Gm24934-201ENSMUST00000103764 111 ntBASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Gm4034-201ENSMUST00000187674 480 ntBASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdha3Q91Y16 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Gm4857-201ENSMUST00000192718 785 ntBASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Gm44651-201ENSMUST00000207343 372 ntBASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdha3Q91Y16 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms