Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha8Q91Y12 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.83□□□□□ -0.52
Pcdha8Q91Y12 Gm4034-201ENSMUST00000187674 480 ntBASIC11.83□□□□□ -0.52
Pcdha8Q91Y12 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.83□□□□□ -0.52
Pcdha8Q91Y12 Gm42937-201ENSMUST00000197360 752 ntBASIC11.83□□□□□ -0.52
Pcdha8Q91Y12 Gm8227-201ENSMUST00000223306 571 ntBASIC11.83□□□□□ -0.52
Pcdha8Q91Y12 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha8Q91Y12 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha8Q91Y12 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha8Q91Y12 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha8Q91Y12 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdha8Q91Y12 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdha8Q91Y12 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdha8Q91Y12 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdha8Q91Y12 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha8Q91Y12 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha8Q91Y12 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha8Q91Y12 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdha8Q91Y12 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdha8Q91Y12 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha8Q91Y12 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha8Q91Y12 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha8Q91Y12 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha8Q91Y12 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha8Q91Y12 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha8Q91Y12 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.52
Pcdha8Q91Y12 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Gm11531-201ENSMUST00000117614 555 ntBASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Gm27501-201ENSMUST00000183599 107 ntBASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Gm5950-201ENSMUST00000213337 772 ntBASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Gm7399-201ENSMUST00000032395 858 ntBASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdha8Q91Y12 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Gm24830-201ENSMUST00000102024 166 ntBASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Gm12241-201ENSMUST00000118330 726 ntBASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Gm26956-201ENSMUST00000182176 986 ntBASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Mir6420-201ENSMUST00000185032 102 ntBASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Gm26232-201ENSMUST00000083360 166 ntBASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdha8Q91Y12 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms