Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usb1Q91W78 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Usb1Q91W78 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usb1Q91W78 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Usb1Q91W78 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usb1Q91W78 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Usb1Q91W78 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usb1Q91W78 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Usb1Q91W78 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usb1Q91W78 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usb1Q91W78 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Usb1Q91W78 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usb1Q91W78 Gm11930-201ENSMUST00000117788 190 ntBASIC12.04□□□□□ -0.48
Usb1Q91W78 Gm12314-201ENSMUST00000118104 538 ntBASIC12.04□□□□□ -0.48
Usb1Q91W78 Gm13875-201ENSMUST00000120162 282 ntBASIC12.04□□□□□ -0.48
Usb1Q91W78 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.04□□□□□ -0.48
Usb1Q91W78 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.04□□□□□ -0.48
Usb1Q91W78 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.04□□□□□ -0.48
Usb1Q91W78 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.04□□□□□ -0.48
Usb1Q91W78 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.04□□□□□ -0.48
Usb1Q91W78 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.04□□□□□ -0.48
Usb1Q91W78 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usb1Q91W78 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.04□□□□□ -0.48
Usb1Q91W78 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usb1Q91W78 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usb1Q91W78 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Usb1Q91W78 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Usb1Q91W78 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Usb1Q91W78 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usb1Q91W78 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usb1Q91W78 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Usb1Q91W78 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Usb1Q91W78 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usb1Q91W78 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Usb1Q91W78 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.04□□□□□ -0.48
Usb1Q91W78 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.04□□□□□ -0.48
Usb1Q91W78 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usb1Q91W78 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.04□□□□□ -0.48
Usb1Q91W78 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Usb1Q91W78 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usb1Q91W78 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.04□□□□□ -0.48
Usb1Q91W78 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usb1Q91W78 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usb1Q91W78 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.04□□□□□ -0.48
Usb1Q91W78 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.03□□□□□ -0.48
Usb1Q91W78 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usb1Q91W78 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usb1Q91W78 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usb1Q91W78 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usb1Q91W78 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usb1Q91W78 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usb1Q91W78 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usb1Q91W78 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usb1Q91W78 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usb1Q91W78 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usb1Q91W78 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usb1Q91W78 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usb1Q91W78 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Usb1Q91W78 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usb1Q91W78 Gm15808-201ENSMUST00000119046 604 ntBASIC12.03□□□□□ -0.48
Usb1Q91W78 Gm15547-201ENSMUST00000122152 333 ntBASIC12.03□□□□□ -0.48
Usb1Q91W78 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usb1Q91W78 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usb1Q91W78 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Usb1Q91W78 Gm17376-201ENSMUST00000166016 84 ntBASIC12.03□□□□□ -0.48
Usb1Q91W78 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Usb1Q91W78 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usb1Q91W78 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.03□□□□□ -0.48
Usb1Q91W78 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Usb1Q91W78 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.03□□□□□ -0.48
Usb1Q91W78 Gm13097-201ENSMUST00000210722 397 ntBASIC12.03□□□□□ -0.48
Usb1Q91W78 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usb1Q91W78 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usb1Q91W78 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usb1Q91W78 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usb1Q91W78 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usb1Q91W78 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usb1Q91W78 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usb1Q91W78 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Usb1Q91W78 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usb1Q91W78 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.03□□□□□ -0.48
Usb1Q91W78 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.02□□□□□ -0.48
Usb1Q91W78 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usb1Q91W78 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.02□□□□□ -0.48
Usb1Q91W78 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Usb1Q91W78 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usb1Q91W78 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.02□□□□□ -0.48
Usb1Q91W78 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usb1Q91W78 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usb1Q91W78 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usb1Q91W78 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usb1Q91W78 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.02□□□□□ -0.49
Usb1Q91W78 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usb1Q91W78 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Usb1Q91W78 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Usb1Q91W78 Gm17244-201ENSMUST00000192482 3416 ntBASIC12.02□□□□□ -0.49
Usb1Q91W78 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Usb1Q91W78 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Usb1Q91W78 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Usb1Q91W78 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms