Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ddx41Q91VN6 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ddx41Q91VN6 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ddx41Q91VN6 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ddx41Q91VN6 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ddx41Q91VN6 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ddx41Q91VN6 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ddx41Q91VN6 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ddx41Q91VN6 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ddx41Q91VN6 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ddx41Q91VN6 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.97□□□□□ -0.17
Ddx41Q91VN6 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.97□□□□□ -0.17
Ddx41Q91VN6 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.97□□□□□ -0.17
Ddx41Q91VN6 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13.97□□□□□ -0.17
Ddx41Q91VN6 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ddx41Q91VN6 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.96□□□□□ -0.17
Ddx41Q91VN6 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Gm42937-201ENSMUST00000197360 752 ntBASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Gm8385-201ENSMUST00000058999 643 ntBASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ddx41Q91VN6 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ddx41Q91VN6 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ddx41Q91VN6 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ddx41Q91VN6 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ddx41Q91VN6 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.96□□□□□ -0.18
Ddx41Q91VN6 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ddx41Q91VN6 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.96□□□□□ -0.18
Ddx41Q91VN6 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx41Q91VN6 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx41Q91VN6 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.95□□□□□ -0.18
Ddx41Q91VN6 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ddx41Q91VN6 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC13.95□□□□□ -0.18
Ddx41Q91VN6 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx41Q91VN6 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx41Q91VN6 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx41Q91VN6 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx41Q91VN6 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx41Q91VN6 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx41Q91VN6 Rmrp-201ENSMUST00000157463 271 ntBASIC13.95□□□□□ -0.18
Ddx41Q91VN6 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx41Q91VN6 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx41Q91VN6 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx41Q91VN6 Gm19208-201ENSMUST00000213861 912 ntBASIC13.95□□□□□ -0.18
Ddx41Q91VN6 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.95□□□□□ -0.18
Ddx41Q91VN6 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.95□□□□□ -0.18
Ddx41Q91VN6 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx41Q91VN6 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx41Q91VN6 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx41Q91VN6 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx41Q91VN6 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ddx41Q91VN6 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx41Q91VN6 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx41Q91VN6 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx41Q91VN6 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ddx41Q91VN6 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.94□□□□□ -0.18
Ddx41Q91VN6 B9d1os-201ENSMUST00000137010 674 ntBASIC13.94□□□□□ -0.18
Ddx41Q91VN6 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx41Q91VN6 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Gm38114-201ENSMUST00000191877 1232 ntBASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Gm7003-201ENSMUST00000195089 312 ntBASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Gm43138-201ENSMUST00000199123 708 ntBASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.94□□□□□ -0.18
Ddx41Q91VN6 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms