Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
StrcQ8VIM6 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
StrcQ8VIM6 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
StrcQ8VIM6 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC14.04□□□□□ -0.16
StrcQ8VIM6 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
StrcQ8VIM6 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
StrcQ8VIM6 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
StrcQ8VIM6 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
StrcQ8VIM6 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
StrcQ8VIM6 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
StrcQ8VIM6 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
StrcQ8VIM6 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
StrcQ8VIM6 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
StrcQ8VIM6 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
StrcQ8VIM6 Gm22937-201ENSMUST00000103954 131 ntBASIC14.04□□□□□ -0.16
StrcQ8VIM6 Snord23-201ENSMUST00000116828 109 ntBASIC14.04□□□□□ -0.16
StrcQ8VIM6 Gm15707-201ENSMUST00000118804 996 ntBASIC14.04□□□□□ -0.16
StrcQ8VIM6 Gm14165-201ENSMUST00000121456 952 ntBASIC14.04□□□□□ -0.16
StrcQ8VIM6 Gm3329-201ENSMUST00000159873 556 ntBASIC14.04□□□□□ -0.16
StrcQ8VIM6 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
StrcQ8VIM6 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC14.04□□□□□ -0.16
StrcQ8VIM6 Gm8384-201ENSMUST00000190905 704 ntBASIC14.04□□□□□ -0.16
StrcQ8VIM6 Gm45310-201ENSMUST00000210436 275 ntBASIC14.04□□□□□ -0.16
StrcQ8VIM6 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC14.04□□□□□ -0.16
StrcQ8VIM6 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
StrcQ8VIM6 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
StrcQ8VIM6 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
StrcQ8VIM6 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Gm16219-201ENSMUST00000120096 274 ntBASIC14.03□□□□□ -0.16
StrcQ8VIM6 Gm22344-201ENSMUST00000122642 278 ntBASIC14.03□□□□□ -0.16
StrcQ8VIM6 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.03□□□□□ -0.16
StrcQ8VIM6 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Gm43966-201ENSMUST00000203301 612 ntBASIC14.03□□□□□ -0.16
StrcQ8VIM6 Id2-203ENSMUST00000222667 958 ntBASIC14.03□□□□□ -0.16
StrcQ8VIM6 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
StrcQ8VIM6 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
StrcQ8VIM6 Matn2-206ENSMUST00000228570 2798 ntBASIC14.02□□□□□ -0.16
StrcQ8VIM6 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
StrcQ8VIM6 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
StrcQ8VIM6 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
StrcQ8VIM6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
StrcQ8VIM6 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.02□□□□□ -0.16
StrcQ8VIM6 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC14.02□□□□□ -0.16
StrcQ8VIM6 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
StrcQ8VIM6 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
StrcQ8VIM6 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
StrcQ8VIM6 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC14.02□□□□□ -0.16
StrcQ8VIM6 Gm15329-201ENSMUST00000121408 155 ntBASIC14.02□□□□□ -0.16
StrcQ8VIM6 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
StrcQ8VIM6 Gm5335-201ENSMUST00000182995 1000 ntBASIC14.02□□□□□ -0.16
StrcQ8VIM6 Gm17796-201ENSMUST00000189015 1213 ntBASIC14.02□□□□□ -0.16
StrcQ8VIM6 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.02□□□□□ -0.16
StrcQ8VIM6 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC14.02□□□□□ -0.16
StrcQ8VIM6 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC14.02□□□□□ -0.16
StrcQ8VIM6 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
StrcQ8VIM6 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
StrcQ8VIM6 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
StrcQ8VIM6 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
StrcQ8VIM6 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
StrcQ8VIM6 Gm10580-201ENSMUST00000097985 396 ntBASIC14.02□□□□□ -0.16
StrcQ8VIM6 Gm10582-201ENSMUST00000097987 396 ntBASIC14.02□□□□□ -0.16
StrcQ8VIM6 Gm10583-201ENSMUST00000097988 396 ntBASIC14.02□□□□□ -0.16
StrcQ8VIM6 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
StrcQ8VIM6 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
StrcQ8VIM6 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
StrcQ8VIM6 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
StrcQ8VIM6 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
StrcQ8VIM6 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
StrcQ8VIM6 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
StrcQ8VIM6 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
StrcQ8VIM6 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
StrcQ8VIM6 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC14.02□□□□□ -0.17
StrcQ8VIM6 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
StrcQ8VIM6 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms