Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
H1fooQ8VIK3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
H1fooQ8VIK3 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.17□□□□□ -0.78
H1fooQ8VIK3 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
H1fooQ8VIK3 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
H1fooQ8VIK3 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H1fooQ8VIK3 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H1fooQ8VIK3 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H1fooQ8VIK3 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.17□□□□□ -0.78
H1fooQ8VIK3 BC043934-202ENSMUST00000185694 2356 ntBASIC10.17□□□□□ -0.78
H1fooQ8VIK3 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
H1fooQ8VIK3 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
H1fooQ8VIK3 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
H1fooQ8VIK3 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
H1fooQ8VIK3 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H1fooQ8VIK3 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H1fooQ8VIK3 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H1fooQ8VIK3 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H1fooQ8VIK3 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Gm25043-201ENSMUST00000158604 212 ntBASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Gm28882-201ENSMUST00000185504 314 ntBASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Gm25857-201ENSMUST00000082788 129 ntBASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
H1fooQ8VIK3 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
H1fooQ8VIK3 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
H1fooQ8VIK3 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
H1fooQ8VIK3 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
H1fooQ8VIK3 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
H1fooQ8VIK3 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
H1fooQ8VIK3 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.15□□□□□ -0.78
H1fooQ8VIK3 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
H1fooQ8VIK3 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
H1fooQ8VIK3 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
H1fooQ8VIK3 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
H1fooQ8VIK3 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
H1fooQ8VIK3 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
H1fooQ8VIK3 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
H1fooQ8VIK3 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
H1fooQ8VIK3 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
H1fooQ8VIK3 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
H1fooQ8VIK3 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
H1fooQ8VIK3 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
H1fooQ8VIK3 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
H1fooQ8VIK3 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
H1fooQ8VIK3 Gm23912-201ENSMUST00000104687 87 ntBASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms