Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13□□□□□ -0.33
TraipQ8VIG6 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TraipQ8VIG6 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13□□□□□ -0.33
TraipQ8VIG6 Gm44124-201ENSMUST00000204159 472 ntBASIC13□□□□□ -0.33
TraipQ8VIG6 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13□□□□□ -0.33
TraipQ8VIG6 AC154680.1-201ENSMUST00000224376 859 ntBASIC13□□□□□ -0.33
TraipQ8VIG6 AC151275.1-201ENSMUST00000224870 585 ntBASIC13□□□□□ -0.33
TraipQ8VIG6 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13□□□□□ -0.33
TraipQ8VIG6 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Dyrk1a-203ENSMUST00000122284 2356 ntTSL 5 BASIC13□□□□□ -0.33
TraipQ8VIG6 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
TraipQ8VIG6 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TraipQ8VIG6 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
TraipQ8VIG6 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.99□□□□□ -0.33
TraipQ8VIG6 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TraipQ8VIG6 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
TraipQ8VIG6 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TraipQ8VIG6 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TraipQ8VIG6 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
TraipQ8VIG6 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TraipQ8VIG6 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
TraipQ8VIG6 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TraipQ8VIG6 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TraipQ8VIG6 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.99□□□□□ -0.33
TraipQ8VIG6 Gm15610-201ENSMUST00000120584 195 ntBASIC12.99□□□□□ -0.33
TraipQ8VIG6 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.99□□□□□ -0.33
TraipQ8VIG6 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.99□□□□□ -0.33
TraipQ8VIG6 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.99□□□□□ -0.33
TraipQ8VIG6 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.99□□□□□ -0.33
TraipQ8VIG6 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.99□□□□□ -0.33
TraipQ8VIG6 Gm9211-201ENSMUST00000182882 975 ntBASIC12.99□□□□□ -0.33
TraipQ8VIG6 Gm44100-201ENSMUST00000204329 436 ntBASIC12.99□□□□□ -0.33
TraipQ8VIG6 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TraipQ8VIG6 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TraipQ8VIG6 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TraipQ8VIG6 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TraipQ8VIG6 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TraipQ8VIG6 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
TraipQ8VIG6 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TraipQ8VIG6 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TraipQ8VIG6 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TraipQ8VIG6 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TraipQ8VIG6 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TraipQ8VIG6 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TraipQ8VIG6 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TraipQ8VIG6 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TraipQ8VIG6 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
TraipQ8VIG6 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.99□□□□□ -0.33
TraipQ8VIG6 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TraipQ8VIG6 Kng2-201ENSMUST00000039338 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TraipQ8VIG6 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TraipQ8VIG6 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TraipQ8VIG6 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TraipQ8VIG6 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TraipQ8VIG6 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TraipQ8VIG6 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
TraipQ8VIG6 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TraipQ8VIG6 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TraipQ8VIG6 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TraipQ8VIG6 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TraipQ8VIG6 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TraipQ8VIG6 Gm15004-201ENSMUST00000119192 630 ntBASIC12.98□□□□□ -0.33
TraipQ8VIG6 Gm13408-201ENSMUST00000119822 798 ntBASIC12.98□□□□□ -0.33
TraipQ8VIG6 Gm13935-201ENSMUST00000121859 798 ntBASIC12.98□□□□□ -0.33
TraipQ8VIG6 Gm19353-201ENSMUST00000184561 445 ntBASIC12.98□□□□□ -0.33
TraipQ8VIG6 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TraipQ8VIG6 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.98□□□□□ -0.33
TraipQ8VIG6 Gm37293-201ENSMUST00000191658 295 ntBASIC12.98□□□□□ -0.33
TraipQ8VIG6 Gm6905-201ENSMUST00000205729 511 ntBASIC12.98□□□□□ -0.33
TraipQ8VIG6 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.98□□□□□ -0.33
TraipQ8VIG6 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TraipQ8VIG6 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TraipQ8VIG6 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
TraipQ8VIG6 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.98□□□□□ -0.33
TraipQ8VIG6 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TraipQ8VIG6 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TraipQ8VIG6 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TraipQ8VIG6 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.98□□□□□ -0.33
TraipQ8VIG6 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TraipQ8VIG6 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TraipQ8VIG6 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TraipQ8VIG6 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TraipQ8VIG6 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TraipQ8VIG6 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms