Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 AC125206.2-201ENSMUST00000217454 574 ntBASIC9.87□□□□□ -0.83
Nup35Q8R4R6 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Gm10012-201ENSMUST00000078252 192 ntBASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nup35Q8R4R6 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nup35Q8R4R6 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Gm24196-201ENSMUST00000179161 110 ntBASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nup35Q8R4R6 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Gm45930-201ENSMUST00000221330 292 ntBASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Gm42463-201ENSMUST00000198041 4886 ntBASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Nup35Q8R4R6 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Gm23912-201ENSMUST00000104687 87 ntBASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Gm4271-201ENSMUST00000174444 973 ntBASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Gm18018-201ENSMUST00000198273 408 ntBASIC9.85□□□□□ -0.83
Nup35Q8R4R6 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Nup35Q8R4R6 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms