Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Gm14208-201ENSMUST00000119645 678 ntBASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Gm27390-201ENSMUST00000184516 176 ntBASIC14.13□□□□□ -0.15
Vps53Q8CCB4 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.13□□□□□ -0.15
Vps53Q8CCB4 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps53Q8CCB4 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Dopey2-207ENSMUST00000227156 7340 ntBASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Gm22334-201ENSMUST00000158070 133 ntBASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Gm24514-201ENSMUST00000174961 285 ntBASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Gm28450-201ENSMUST00000187349 638 ntBASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Gm44405-201ENSMUST00000198952 126 ntBASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Gm44262-201ENSMUST00000204969 372 ntBASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Gm8385-201ENSMUST00000058999 643 ntBASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Vps53Q8CCB4 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps53Q8CCB4 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.11□□□□□ -0.15
Vps53Q8CCB4 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps53Q8CCB4 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps53Q8CCB4 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps53Q8CCB4 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps53Q8CCB4 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps53Q8CCB4 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps53Q8CCB4 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps53Q8CCB4 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Vps53Q8CCB4 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Vps53Q8CCB4 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps53Q8CCB4 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps53Q8CCB4 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.11□□□□□ -0.15
Vps53Q8CCB4 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.11□□□□□ -0.15
Vps53Q8CCB4 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.11□□□□□ -0.15
Vps53Q8CCB4 Gm27023-201ENSMUST00000182372 285 ntBASIC14.11□□□□□ -0.15
Vps53Q8CCB4 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.11□□□□□ -0.15
Vps53Q8CCB4 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.11□□□□□ -0.15
Vps53Q8CCB4 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps53Q8CCB4 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps53Q8CCB4 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps53Q8CCB4 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps53Q8CCB4 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps53Q8CCB4 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms