Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Shisa4Q8CA71 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Gm18038-201ENSMUST00000197900 485 ntBASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Gm18393-201ENSMUST00000208349 1131 ntBASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Gm4157-201ENSMUST00000211647 679 ntBASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Gm26448-201ENSMUST00000082446 203 ntBASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Gm42913-201ENSMUST00000197936 1853 ntBASIC14.01□□□□□ -0.17
Shisa4Q8CA71 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shisa4Q8CA71 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa4Q8CA71 Gm43773-201ENSMUST00000198548 2162 ntBASIC14□□□□□ -0.17
Shisa4Q8CA71 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14□□□□□ -0.17
Shisa4Q8CA71 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa4Q8CA71 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14□□□□□ -0.17
Shisa4Q8CA71 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa4Q8CA71 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC14□□□□□ -0.17
Shisa4Q8CA71 Gm43081-201ENSMUST00000199082 1380 ntBASIC14□□□□□ -0.17
Shisa4Q8CA71 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC14□□□□□ -0.17
Shisa4Q8CA71 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC14□□□□□ -0.17
Shisa4Q8CA71 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa4Q8CA71 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa4Q8CA71 Gm6335-201ENSMUST00000118081 1194 ntBASIC14□□□□□ -0.17
Shisa4Q8CA71 Gm7816-201ENSMUST00000119884 1194 ntBASIC14□□□□□ -0.17
Shisa4Q8CA71 Gm15542-201ENSMUST00000121585 1194 ntBASIC14□□□□□ -0.17
Shisa4Q8CA71 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
Shisa4Q8CA71 Gm38228-201ENSMUST00000193169 1293 ntBASIC14□□□□□ -0.17
Shisa4Q8CA71 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC14□□□□□ -0.17
Shisa4Q8CA71 Gm44551-201ENSMUST00000208804 171 ntBASIC14□□□□□ -0.17
Shisa4Q8CA71 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
Shisa4Q8CA71 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC14□□□□□ -0.17
Shisa4Q8CA71 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Shisa4Q8CA71 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa4Q8CA71 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa4Q8CA71 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14□□□□□ -0.17
Shisa4Q8CA71 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Shisa4Q8CA71 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14□□□□□ -0.17
Shisa4Q8CA71 Gm37472-201ENSMUST00000192342 4052 ntBASIC14□□□□□ -0.17
Shisa4Q8CA71 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa4Q8CA71 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa4Q8CA71 Ptprm-203ENSMUST00000224091 3773 ntBASIC14□□□□□ -0.17
Shisa4Q8CA71 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa4Q8CA71 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Shisa4Q8CA71 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Shisa4Q8CA71 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa4Q8CA71 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC14□□□□□ -0.17
Shisa4Q8CA71 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Shisa4Q8CA71 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Shisa4Q8CA71 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms