Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC15.44■□□□□ 0.06
Ccdc60Q8C4J0 AC157950.1-201ENSMUST00000217561 2168 ntBASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Gm45743-201ENSMUST00000212701 2795 ntBASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Gm43962-201ENSMUST00000203898 190 ntBASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Gm17812-201ENSMUST00000204935 318 ntBASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 CT571245.2-201ENSMUST00000218421 305 ntBASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc60Q8C4J0 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Gm4607-201ENSMUST00000206649 577 ntBASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc60Q8C4J0 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 Gm44241-201ENSMUST00000203230 1662 ntBASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 Zfp125-201ENSMUST00000079237 2488 ntBASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 Gm18893-201ENSMUST00000198416 943 ntBASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 Gm45186-201ENSMUST00000206874 478 ntBASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc60Q8C4J0 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms