Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh3rf3Q8C120 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Sh3rf3Q8C120 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Sh3rf3Q8C120 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Sh3rf3Q8C120 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Sh3rf3Q8C120 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Sh3rf3Q8C120 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Sh3rf3Q8C120 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Gm15198-201ENSMUST00000117283 177 ntBASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf3Q8C120 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Sh3rf3Q8C120 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sh3rf3Q8C120 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sh3rf3Q8C120 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf3Q8C120 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf3Q8C120 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf3Q8C120 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.63□□□□□ -0.39
Sh3rf3Q8C120 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.63□□□□□ -0.39
Sh3rf3Q8C120 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.63□□□□□ -0.39
Sh3rf3Q8C120 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.63□□□□□ -0.39
Sh3rf3Q8C120 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf3Q8C120 Gm45331-201ENSMUST00000209868 554 ntBASIC12.63□□□□□ -0.39
Sh3rf3Q8C120 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.63□□□□□ -0.39
Sh3rf3Q8C120 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf3Q8C120 Gm9996-201ENSMUST00000070359 913 ntBASIC12.63□□□□□ -0.39
Sh3rf3Q8C120 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sh3rf3Q8C120 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf3Q8C120 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf3Q8C120 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sh3rf3Q8C120 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sh3rf3Q8C120 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf3Q8C120 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.63□□□□□ -0.39
Sh3rf3Q8C120 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf3Q8C120 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf3Q8C120 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Sh3rf3Q8C120 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf3Q8C120 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms