Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC13.47□□□□□ -0.25
Trim47Q8C0E3 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.47□□□□□ -0.25
Trim47Q8C0E3 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.47□□□□□ -0.25
Trim47Q8C0E3 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.47□□□□□ -0.25
Trim47Q8C0E3 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim47Q8C0E3 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim47Q8C0E3 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim47Q8C0E3 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim47Q8C0E3 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trim47Q8C0E3 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim47Q8C0E3 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim47Q8C0E3 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim47Q8C0E3 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim47Q8C0E3 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim47Q8C0E3 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim47Q8C0E3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.46□□□□□ -0.25
Trim47Q8C0E3 Mir5120-201ENSMUST00000175020 78 ntBASIC13.46□□□□□ -0.25
Trim47Q8C0E3 Gm25732-201ENSMUST00000175168 60 ntBASIC13.46□□□□□ -0.25
Trim47Q8C0E3 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trim47Q8C0E3 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.46□□□□□ -0.25
Trim47Q8C0E3 Gm7430-201ENSMUST00000193824 1144 ntBASIC13.46□□□□□ -0.25
Trim47Q8C0E3 Gm18893-201ENSMUST00000198416 943 ntBASIC13.46□□□□□ -0.25
Trim47Q8C0E3 Gm18753-201ENSMUST00000201000 566 ntBASIC13.46□□□□□ -0.25
Trim47Q8C0E3 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim47Q8C0E3 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim47Q8C0E3 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim47Q8C0E3 Olfr1347-205ENSMUST00000220413 964 ntBASIC13.46□□□□□ -0.25
Trim47Q8C0E3 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim47Q8C0E3 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trim47Q8C0E3 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.46□□□□□ -0.25
Trim47Q8C0E3 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trim47Q8C0E3 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim47Q8C0E3 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trim47Q8C0E3 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim47Q8C0E3 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trim47Q8C0E3 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim47Q8C0E3 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Trim47Q8C0E3 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim47Q8C0E3 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim47Q8C0E3 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Trim47Q8C0E3 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim47Q8C0E3 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.46□□□□□ -0.26
Trim47Q8C0E3 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trim47Q8C0E3 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trim47Q8C0E3 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Trim47Q8C0E3 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim47Q8C0E3 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim47Q8C0E3 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim47Q8C0E3 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim47Q8C0E3 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.45□□□□□ -0.26
Trim47Q8C0E3 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim47Q8C0E3 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim47Q8C0E3 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Trim47Q8C0E3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim47Q8C0E3 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trim47Q8C0E3 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim47Q8C0E3 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.45□□□□□ -0.26
Trim47Q8C0E3 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim47Q8C0E3 Gm36943-201ENSMUST00000194422 282 ntBASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms