Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4Q8BQZ5 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cpsf4Q8BQZ5 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.77□□□□□ -0.52
Cpsf4Q8BQZ5 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cpsf4Q8BQZ5 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.52
Cpsf4Q8BQZ5 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cpsf4Q8BQZ5 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cpsf4Q8BQZ5 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.77□□□□□ -0.52
Cpsf4Q8BQZ5 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Cpsf4Q8BQZ5 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cpsf4Q8BQZ5 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cpsf4Q8BQZ5 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cpsf4Q8BQZ5 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cpsf4Q8BQZ5 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cpsf4Q8BQZ5 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Cpsf4Q8BQZ5 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cpsf4Q8BQZ5 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cpsf4Q8BQZ5 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cpsf4Q8BQZ5 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.77□□□□□ -0.53
Cpsf4Q8BQZ5 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Cpsf4Q8BQZ5 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.77□□□□□ -0.53
Cpsf4Q8BQZ5 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cpsf4Q8BQZ5 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.77□□□□□ -0.53
Cpsf4Q8BQZ5 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Cpsf4Q8BQZ5 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Cpsf4Q8BQZ5 Gm8018-201ENSMUST00000173536 789 ntBASIC11.77□□□□□ -0.53
Cpsf4Q8BQZ5 Gm38241-201ENSMUST00000192641 898 ntBASIC11.77□□□□□ -0.53
Cpsf4Q8BQZ5 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.77□□□□□ -0.53
Cpsf4Q8BQZ5 Gm45925-201ENSMUST00000218882 744 ntBASIC11.77□□□□□ -0.53
Cpsf4Q8BQZ5 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cpsf4Q8BQZ5 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cpsf4Q8BQZ5 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cpsf4Q8BQZ5 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cpsf4Q8BQZ5 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cpsf4Q8BQZ5 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.77□□□□□ -0.53
Cpsf4Q8BQZ5 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cpsf4Q8BQZ5 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.77□□□□□ -0.53
Cpsf4Q8BQZ5 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cpsf4Q8BQZ5 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cpsf4Q8BQZ5 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cpsf4Q8BQZ5 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cpsf4Q8BQZ5 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cpsf4Q8BQZ5 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Gm12058-201ENSMUST00000118614 437 ntBASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Gm17376-201ENSMUST00000166016 84 ntBASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Gm9257-201ENSMUST00000221254 232 ntBASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.76□□□□□ -0.53
Cpsf4Q8BQZ5 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms