Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12□□□□□ -0.49
Pcdh8Q7TSK3 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 Gm27552-201ENSMUST00000183351 62 ntBASIC12□□□□□ -0.49
Pcdh8Q7TSK3 Gm27844-201ENSMUST00000183613 62 ntBASIC12□□□□□ -0.49
Pcdh8Q7TSK3 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 AC159205.5-202ENSMUST00000224849 386 ntBASIC12□□□□□ -0.49
Pcdh8Q7TSK3 Dhrs4-202ENSMUST00000226168 828 ntBASIC12□□□□□ -0.49
Pcdh8Q7TSK3 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 Gm27177-202ENSMUST00000183514 2703 ntBASIC12□□□□□ -0.49
Pcdh8Q7TSK3 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdh8Q7TSK3 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Gm15711-201ENSMUST00000118889 535 ntBASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Gm11331-201ENSMUST00000119764 288 ntBASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdh8Q7TSK3 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 Gm23949-201ENSMUST00000104027 127 ntBASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 Gm37986-201ENSMUST00000193285 383 ntBASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 Gm37666-201ENSMUST00000194110 866 ntBASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdh8Q7TSK3 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms