Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rif1Q6PR54 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.76
Rif1Q6PR54 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rif1Q6PR54 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rif1Q6PR54 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Rif1Q6PR54 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rif1Q6PR54 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC10.27□□□□□ -0.76
Rif1Q6PR54 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC10.27□□□□□ -0.76
Rif1Q6PR54 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC10.27□□□□□ -0.76
Rif1Q6PR54 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rif1Q6PR54 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rif1Q6PR54 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rif1Q6PR54 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rif1Q6PR54 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rif1Q6PR54 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC10.27□□□□□ -0.77
Rif1Q6PR54 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rif1Q6PR54 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rif1Q6PR54 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rif1Q6PR54 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rif1Q6PR54 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rif1Q6PR54 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rif1Q6PR54 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Rif1Q6PR54 Gm25562-201ENSMUST00000104608 133 ntBASIC10.27□□□□□ -0.77
Rif1Q6PR54 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rif1Q6PR54 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rif1Q6PR54 Gm15196-201ENSMUST00000121406 482 ntBASIC10.27□□□□□ -0.77
Rif1Q6PR54 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC10.27□□□□□ -0.77
Rif1Q6PR54 Gm44506-201ENSMUST00000206278 965 ntBASIC10.27□□□□□ -0.77
Rif1Q6PR54 Gm19228-201ENSMUST00000214030 717 ntBASIC10.27□□□□□ -0.77
Rif1Q6PR54 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rif1Q6PR54 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.27□□□□□ -0.77
Rif1Q6PR54 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC10.27□□□□□ -0.77
Rif1Q6PR54 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.27□□□□□ -0.77
Rif1Q6PR54 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rif1Q6PR54 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.27□□□□□ -0.77
Rif1Q6PR54 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rif1Q6PR54 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rif1Q6PR54 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rif1Q6PR54 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rif1Q6PR54 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rif1Q6PR54 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rif1Q6PR54 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rif1Q6PR54 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rif1Q6PR54 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Rif1Q6PR54 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rif1Q6PR54 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Gm26286-201ENSMUST00000104166 134 ntBASIC10.26□□□□□ -0.77
Rif1Q6PR54 Gm11989-201ENSMUST00000117240 672 ntBASIC10.26□□□□□ -0.77
Rif1Q6PR54 Gm11362-201ENSMUST00000118838 850 ntBASIC10.26□□□□□ -0.77
Rif1Q6PR54 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.26□□□□□ -0.77
Rif1Q6PR54 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rif1Q6PR54 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.26□□□□□ -0.77
Rif1Q6PR54 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.26□□□□□ -0.77
Rif1Q6PR54 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rif1Q6PR54 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.26□□□□□ -0.77
Rif1Q6PR54 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Gm13094-201ENSMUST00000117930 409 ntBASIC10.26□□□□□ -0.77
Rif1Q6PR54 Gm12274-201ENSMUST00000120062 385 ntBASIC10.26□□□□□ -0.77
Rif1Q6PR54 Gm15566-201ENSMUST00000121130 590 ntBASIC10.26□□□□□ -0.77
Rif1Q6PR54 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC10.26□□□□□ -0.77
Rif1Q6PR54 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rif1Q6PR54 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.26□□□□□ -0.77
Rif1Q6PR54 AC124613.1-201ENSMUST00000198711 88 ntBASIC10.26□□□□□ -0.77
Rif1Q6PR54 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rif1Q6PR54 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rif1Q6PR54 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rif1Q6PR54 Gm9867-201ENSMUST00000192212 2647 ntBASIC10.26□□□□□ -0.77
Rif1Q6PR54 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rif1Q6PR54 AC130823.1-201ENSMUST00000228929 1549 ntBASIC10.26□□□□□ -0.77
Rif1Q6PR54 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms