Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Gm22323-201ENSMUST00000103832 109 ntBASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Gm13097-201ENSMUST00000210722 397 ntBASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.3□□□□□ -0.44
Casc4Q6P2L7 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Casc4Q6P2L7 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Gm14109-201ENSMUST00000118814 309 ntBASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Gzmn-202ENSMUST00000225535 989 ntBASIC12.29□□□□□ -0.44
Casc4Q6P2L7 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Casc4Q6P2L7 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Casc4Q6P2L7 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms