Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Gm8451-201ENSMUST00000170338 447 ntBASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Gm43163-201ENSMUST00000196571 442 ntBASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Gm7536-201ENSMUST00000077389 444 ntBASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Gm5453-201ENSMUST00000080866 447 ntBASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slx4Q6P1D7 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slx4Q6P1D7 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC18.33■□□□□ 0.53
Slx4Q6P1D7 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slx4Q6P1D7 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slx4Q6P1D7 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slx4Q6P1D7 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slx4Q6P1D7 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slx4Q6P1D7 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Slx4Q6P1D7 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC18.33■□□□□ 0.53
Slx4Q6P1D7 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slx4Q6P1D7 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slx4Q6P1D7 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Slx4Q6P1D7 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slx4Q6P1D7 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Slx4Q6P1D7 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slx4Q6P1D7 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slx4Q6P1D7 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Slx4Q6P1D7 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Slx4Q6P1D7 Gm22846-201ENSMUST00000157706 270 ntBASIC18.33■□□□□ 0.52
Slx4Q6P1D7 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Slx4Q6P1D7 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slx4Q6P1D7 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Slx4Q6P1D7 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC18.33■□□□□ 0.52
Slx4Q6P1D7 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slx4Q6P1D7 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC18.33■□□□□ 0.52
Slx4Q6P1D7 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Slx4Q6P1D7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slx4Q6P1D7 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Slx4Q6P1D7 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slx4Q6P1D7 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slx4Q6P1D7 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC18.32■□□□□ 0.52
Slx4Q6P1D7 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slx4Q6P1D7 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slx4Q6P1D7 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
Slx4Q6P1D7 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Slx4Q6P1D7 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Slx4Q6P1D7 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Slx4Q6P1D7 Gm13445-201ENSMUST00000121664 307 ntBASIC18.32■□□□□ 0.52
Slx4Q6P1D7 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Slx4Q6P1D7 Gm12906-201ENSMUST00000154610 441 ntBASIC18.32■□□□□ 0.52
Slx4Q6P1D7 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC18.32■□□□□ 0.52
Slx4Q6P1D7 Gm45135-201ENSMUST00000206787 1184 ntBASIC18.32■□□□□ 0.52
Slx4Q6P1D7 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC18.32■□□□□ 0.52
Slx4Q6P1D7 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slx4Q6P1D7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Slx4Q6P1D7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Slx4Q6P1D7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slx4Q6P1D7 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC18.32■□□□□ 0.52
Slx4Q6P1D7 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Slx4Q6P1D7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Slx4Q6P1D7 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slx4Q6P1D7 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slx4Q6P1D7 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Slx4Q6P1D7 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slx4Q6P1D7 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slx4Q6P1D7 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slx4Q6P1D7 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slx4Q6P1D7 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC18.31■□□□□ 0.52
Slx4Q6P1D7 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slx4Q6P1D7 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC18.31■□□□□ 0.52
Slx4Q6P1D7 Gm18801-201ENSMUST00000186616 536 ntBASIC18.31■□□□□ 0.52
Slx4Q6P1D7 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slx4Q6P1D7 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC18.31■□□□□ 0.52
Slx4Q6P1D7 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Slx4Q6P1D7 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slx4Q6P1D7 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Slx4Q6P1D7 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slx4Q6P1D7 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slx4Q6P1D7 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slx4Q6P1D7 Gm44152-201ENSMUST00000205007 1691 ntBASIC18.31■□□□□ 0.52
Slx4Q6P1D7 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Slx4Q6P1D7 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slx4Q6P1D7 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slx4Q6P1D7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slx4Q6P1D7 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slx4Q6P1D7 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC18.3■□□□□ 0.52
Slx4Q6P1D7 Gm15172-201ENSMUST00000118945 1046 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms