Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sp140Q6NSQ5 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Gm6013-201ENSMUST00000212264 699 ntBASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Gm18935-201ENSMUST00000212692 664 ntBASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Gm8712-201ENSMUST00000221090 701 ntBASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sp140Q6NSQ5 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Gm14247-201ENSMUST00000120950 237 ntBASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Gm9136-201ENSMUST00000193368 454 ntBASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Gm42693-201ENSMUST00000196779 631 ntBASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sp140Q6NSQ5 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sp140Q6NSQ5 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sp140Q6NSQ5 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sp140Q6NSQ5 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.27□□□□□ -0.44
Sp140Q6NSQ5 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms