Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.39□□□□□ -0.27
Krt39Q6IFX4 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Gm13875-201ENSMUST00000120162 282 ntBASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Gm14999-201ENSMUST00000121039 624 ntBASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Gm8062-201ENSMUST00000139696 444 ntBASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Krt39Q6IFX4 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Krt39Q6IFX4 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt39Q6IFX4 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms