Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nr1h4Q60641 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nr1h4Q60641 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Gm12314-201ENSMUST00000118104 538 ntBASIC11.57□□□□□ -0.56
Nr1h4Q60641 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.57□□□□□ -0.56
Nr1h4Q60641 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Gm7029-201ENSMUST00000173226 450 ntBASIC11.57□□□□□ -0.56
Nr1h4Q60641 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.57□□□□□ -0.56
Nr1h4Q60641 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nr1h4Q60641 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.56□□□□□ -0.56
Nr1h4Q60641 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Gm14928-201ENSMUST00000120198 477 ntBASIC11.56□□□□□ -0.56
Nr1h4Q60641 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Gm27847-201ENSMUST00000183711 107 ntBASIC11.56□□□□□ -0.56
Nr1h4Q60641 Gm27375-201ENSMUST00000183799 107 ntBASIC11.56□□□□□ -0.56
Nr1h4Q60641 Gm6745-201ENSMUST00000199216 526 ntBASIC11.56□□□□□ -0.56
Nr1h4Q60641 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Gm45925-201ENSMUST00000218882 744 ntBASIC11.56□□□□□ -0.56
Nr1h4Q60641 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.56□□□□□ -0.56
Nr1h4Q60641 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.56□□□□□ -0.56
Nr1h4Q60641 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.56□□□□□ -0.56
Nr1h4Q60641 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Nr1h4Q60641 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms