Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Satb1Q60611 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.67□□□□□ -0.38
Satb1Q60611 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
Satb1Q60611 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.67□□□□□ -0.38
Satb1Q60611 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.67□□□□□ -0.38
Satb1Q60611 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.67□□□□□ -0.38
Satb1Q60611 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.67□□□□□ -0.38
Satb1Q60611 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Satb1Q60611 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Gm12628-201ENSMUST00000122193 382 ntBASIC12.67□□□□□ -0.38
Satb1Q60611 Gm11978-201ENSMUST00000122315 466 ntBASIC12.67□□□□□ -0.38
Satb1Q60611 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.67□□□□□ -0.38
Satb1Q60611 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.67□□□□□ -0.38
Satb1Q60611 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.67□□□□□ -0.38
Satb1Q60611 Gm42779-201ENSMUST00000198807 406 ntBASIC12.67□□□□□ -0.38
Satb1Q60611 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Satb1Q60611 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.67□□□□□ -0.38
Satb1Q60611 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Satb1Q60611 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.67□□□□□ -0.38
Satb1Q60611 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Satb1Q60611 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.67□□□□□ -0.38
Satb1Q60611 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Satb1Q60611 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Satb1Q60611 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Satb1Q60611 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.66□□□□□ -0.38
Satb1Q60611 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Satb1Q60611 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.66□□□□□ -0.38
Satb1Q60611 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Satb1Q60611 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.66□□□□□ -0.38
Satb1Q60611 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Satb1Q60611 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Satb1Q60611 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.66□□□□□ -0.38
Satb1Q60611 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.66□□□□□ -0.38
Satb1Q60611 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Satb1Q60611 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.66□□□□□ -0.38
Satb1Q60611 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.66□□□□□ -0.38
Satb1Q60611 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Satb1Q60611 Gm11941-201ENSMUST00000119904 610 ntBASIC12.66□□□□□ -0.38
Satb1Q60611 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.66□□□□□ -0.38
Satb1Q60611 Gm15881-201ENSMUST00000148792 942 ntBASIC12.66□□□□□ -0.38
Satb1Q60611 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.66□□□□□ -0.38
Satb1Q60611 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.66□□□□□ -0.38
Satb1Q60611 AY036118-201ENSMUST00000200021 923 ntBASIC12.66□□□□□ -0.38
Satb1Q60611 Gm9463-201ENSMUST00000206707 601 ntBASIC12.66□□□□□ -0.38
Satb1Q60611 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.66□□□□□ -0.38
Satb1Q60611 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Satb1Q60611 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.66□□□□□ -0.38
Satb1Q60611 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Satb1Q60611 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Satb1Q60611 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Satb1Q60611 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Satb1Q60611 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Satb1Q60611 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Satb1Q60611 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Satb1Q60611 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Satb1Q60611 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Satb1Q60611 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Satb1Q60611 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Satb1Q60611 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Satb1Q60611 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Satb1Q60611 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Satb1Q60611 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Satb1Q60611 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Satb1Q60611 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Satb1Q60611 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Satb1Q60611 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Satb1Q60611 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Satb1Q60611 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Satb1Q60611 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Satb1Q60611 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Satb1Q60611 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms