Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.53□□□□□ -0.08
Vps54Q5SPW0 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps54Q5SPW0 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps54Q5SPW0 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps54Q5SPW0 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.52□□□□□ -0.08
Vps54Q5SPW0 Gm8155-201ENSMUST00000216363 1612 ntBASIC14.52□□□□□ -0.08
Vps54Q5SPW0 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps54Q5SPW0 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps54Q5SPW0 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps54Q5SPW0 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps54Q5SPW0 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps54Q5SPW0 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps54Q5SPW0 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps54Q5SPW0 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps54Q5SPW0 Gm26286-201ENSMUST00000104166 134 ntBASIC14.52□□□□□ -0.09
Vps54Q5SPW0 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps54Q5SPW0 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Vps54Q5SPW0 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Vps54Q5SPW0 Gm11511-201ENSMUST00000118146 540 ntBASIC14.52□□□□□ -0.09
Vps54Q5SPW0 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vps54Q5SPW0 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vps54Q5SPW0 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps54Q5SPW0 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vps54Q5SPW0 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.52□□□□□ -0.09
Vps54Q5SPW0 AC121960.1-201ENSMUST00000227982 564 ntBASIC14.52□□□□□ -0.09
Vps54Q5SPW0 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps54Q5SPW0 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps54Q5SPW0 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps54Q5SPW0 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.52□□□□□ -0.09
Vps54Q5SPW0 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Vps54Q5SPW0 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps54Q5SPW0 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps54Q5SPW0 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps54Q5SPW0 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps54Q5SPW0 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps54Q5SPW0 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
Vps54Q5SPW0 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vps54Q5SPW0 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps54Q5SPW0 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps54Q5SPW0 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Vps54Q5SPW0 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps54Q5SPW0 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vps54Q5SPW0 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps54Q5SPW0 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Gm4909-201ENSMUST00000118749 794 ntBASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.51□□□□□ -0.09
Vps54Q5SPW0 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vps54Q5SPW0 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Gm9796-201ENSMUST00000062249 2250 ntBASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Gm13812-201ENSMUST00000118061 1347 ntBASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Gm13810-201ENSMUST00000118584 1347 ntBASIC14.5□□□□□ -0.09
Vps54Q5SPW0 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms