Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Gm13045-201ENSMUST00000119019 712 ntBASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Cd63-ps-202ENSMUST00000154992 717 ntBASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Gm44124-201ENSMUST00000204159 472 ntBASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rc3h1Q4VGL6 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.02□□□□□ -0.16
Rc3h1Q4VGL6 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Rc3h1Q4VGL6 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rc3h1Q4VGL6 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rc3h1Q4VGL6 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.02□□□□□ -0.16
Rc3h1Q4VGL6 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rc3h1Q4VGL6 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Rc3h1Q4VGL6 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.02□□□□□ -0.16
Rc3h1Q4VGL6 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rc3h1Q4VGL6 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Rc3h1Q4VGL6 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rc3h1Q4VGL6 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Rc3h1Q4VGL6 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.02□□□□□ -0.17
Rc3h1Q4VGL6 Gm23251-201ENSMUST00000103773 110 ntBASIC14.02□□□□□ -0.17
Rc3h1Q4VGL6 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.02□□□□□ -0.17
Rc3h1Q4VGL6 Gm7851-201ENSMUST00000117574 323 ntBASIC14.02□□□□□ -0.17
Rc3h1Q4VGL6 Gm12857-201ENSMUST00000117678 592 ntBASIC14.02□□□□□ -0.17
Rc3h1Q4VGL6 Gm13611-201ENSMUST00000118269 318 ntBASIC14.02□□□□□ -0.17
Rc3h1Q4VGL6 Gm12501-201ENSMUST00000119163 529 ntBASIC14.02□□□□□ -0.17
Rc3h1Q4VGL6 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rc3h1Q4VGL6 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.02□□□□□ -0.17
Rc3h1Q4VGL6 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rc3h1Q4VGL6 Gm5706-201ENSMUST00000181525 993 ntBASIC14.02□□□□□ -0.17
Rc3h1Q4VGL6 Gm28686-201ENSMUST00000187404 609 ntBASIC14.02□□□□□ -0.17
Rc3h1Q4VGL6 Gm8956-201ENSMUST00000203939 825 ntBASIC14.02□□□□□ -0.17
Rc3h1Q4VGL6 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rc3h1Q4VGL6 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rc3h1Q4VGL6 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rc3h1Q4VGL6 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rc3h1Q4VGL6 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rc3h1Q4VGL6 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.02□□□□□ -0.17
Rc3h1Q4VGL6 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rc3h1Q4VGL6 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.02□□□□□ -0.17
Rc3h1Q4VGL6 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Gm12165-201ENSMUST00000117047 342 ntBASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Gm9062-201ENSMUST00000117712 727 ntBASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Gm45118-201ENSMUST00000208928 825 ntBASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 AC154276.3-201ENSMUST00000227643 998 ntBASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rc3h1Q4VGL6 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rc3h1Q4VGL6 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rc3h1Q4VGL6 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rc3h1Q4VGL6 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rc3h1Q4VGL6 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Rc3h1Q4VGL6 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rc3h1Q4VGL6 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rc3h1Q4VGL6 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms