Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Gm18304-201ENSMUST00000189162 546 ntBASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Gm38341-201ENSMUST00000195357 515 ntBASIC12.89□□□□□ -0.35
Syne3Q4FZC9 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Syne3Q4FZC9 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Gm14726-201ENSMUST00000120623 896 ntBASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Gm44958-201ENSMUST00000203734 736 ntBASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Gm39404-201ENSMUST00000216350 313 ntBASIC12.88□□□□□ -0.35
Syne3Q4FZC9 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.88□□□□□ -0.35
Syne3Q4FZC9 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.87□□□□□ -0.35
Syne3Q4FZC9 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms