Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf38aQ4FK66 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Gm14263-201ENSMUST00000117955 746 ntBASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Gm15610-201ENSMUST00000120584 195 ntBASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Gm28686-201ENSMUST00000187404 609 ntBASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Gm37246-201ENSMUST00000192665 835 ntBASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Gm44124-201ENSMUST00000204159 472 ntBASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.15□□□□□ -0.14
Prpf38aQ4FK66 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Gm15004-201ENSMUST00000119192 630 ntBASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Gm11660-201ENSMUST00000120955 412 ntBASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Gm12176-201ENSMUST00000121420 875 ntBASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Gm9211-201ENSMUST00000182882 975 ntBASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 AC151275.1-201ENSMUST00000224870 585 ntBASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Gm1821-202ENSMUST00000227415 750 ntBASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Ntng1-201ENSMUST00000051253 327 ntBASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Gm10288-201ENSMUST00000084614 537 ntBASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prpf38aQ4FK66 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms