Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 AC124613.1-201ENSMUST00000198711 88 ntBASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Gm7939-201ENSMUST00000201233 1050 ntBASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 BC080696-201ENSMUST00000202858 1218 ntBASIC11.12□□□□□ -0.63
Spg11Q3UHA3 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Spg11Q3UHA3 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Gm15625-201ENSMUST00000117617 1093 ntBASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Gm12164-201ENSMUST00000121695 551 ntBASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Gm8268-201ENSMUST00000209683 458 ntBASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 CT571271.1-201ENSMUST00000227071 670 ntBASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Gm14005-210ENSMUST00000225087 1413 ntBASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.11□□□□□ -0.63
Spg11Q3UHA3 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Gm6755-201ENSMUST00000100598 864 ntBASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Gm6740-201ENSMUST00000100617 864 ntBASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Mir7088-201ENSMUST00000184227 86 ntBASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 AC166361.2-201ENSMUST00000219269 1415 ntBASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms