Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Chd8Q09XV5 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd8Q09XV5 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Gm37826-201ENSMUST00000195329 322 ntBASIC10.8□□□□□ -0.68
Chd8Q09XV5 Gm42655-201ENSMUST00000202782 1134 ntBASIC10.8□□□□□ -0.68
Chd8Q09XV5 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Gm43548-201ENSMUST00000197139 2353 ntBASIC10.8□□□□□ -0.68
Chd8Q09XV5 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chd8Q09XV5 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC10.8□□□□□ -0.68
Chd8Q09XV5 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Gm5431-201ENSMUST00000109209 1701 ntTSL 5 BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Gm23582-201ENSMUST00000158530 139 ntBASIC10.8□□□□□ -0.68
Chd8Q09XV5 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Gm9771-201ENSMUST00000198267 1137 ntBASIC10.8□□□□□ -0.68
Chd8Q09XV5 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.8□□□□□ -0.68
Chd8Q09XV5 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Chd8Q09XV5 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Chd8Q09XV5 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Gm16030-201ENSMUST00000159098 603 ntBASIC10.79□□□□□ -0.68
Chd8Q09XV5 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC10.79□□□□□ -0.68
Chd8Q09XV5 Mir6934-201ENSMUST00000183965 62 ntBASIC10.79□□□□□ -0.68
Chd8Q09XV5 Gm45225-201ENSMUST00000206852 1139 ntBASIC10.79□□□□□ -0.68
Chd8Q09XV5 AC164614.1-201ENSMUST00000216038 397 ntBASIC10.79□□□□□ -0.68
Chd8Q09XV5 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Gm37297-201ENSMUST00000192974 2384 ntBASIC10.79□□□□□ -0.68
Chd8Q09XV5 Mir453-201ENSMUST00000104732 82 ntBASIC10.79□□□□□ -0.68
Chd8Q09XV5 Gm15615-201ENSMUST00000118876 198 ntBASIC10.79□□□□□ -0.68
Chd8Q09XV5 Gm14497-201ENSMUST00000119537 580 ntBASIC10.79□□□□□ -0.68
Chd8Q09XV5 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Gm26272-201ENSMUST00000179241 132 ntBASIC10.79□□□□□ -0.68
Chd8Q09XV5 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Gm8574-201ENSMUST00000203207 924 ntBASIC10.79□□□□□ -0.68
Chd8Q09XV5 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Gm6859-201ENSMUST00000218614 989 ntBASIC10.79□□□□□ -0.68
Chd8Q09XV5 CT009550.1-201ENSMUST00000225750 864 ntBASIC10.79□□□□□ -0.68
Chd8Q09XV5 AC121567.1-201ENSMUST00000227213 842 ntBASIC10.79□□□□□ -0.68
Chd8Q09XV5 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms