Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col9a2Q07643 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col9a2Q07643 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col9a2Q07643 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Col9a2Q07643 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.12□□□□□ -0.31
Col9a2Q07643 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.12□□□□□ -0.31
Col9a2Q07643 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col9a2Q07643 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col9a2Q07643 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col9a2Q07643 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.12□□□□□ -0.31
Col9a2Q07643 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Col9a2Q07643 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Col9a2Q07643 Gm15573-201ENSMUST00000119487 540 ntBASIC13.12□□□□□ -0.31
Col9a2Q07643 Gm11941-201ENSMUST00000119904 610 ntBASIC13.12□□□□□ -0.31
Col9a2Q07643 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC13.12□□□□□ -0.31
Col9a2Q07643 Gm8100-201ENSMUST00000182906 988 ntBASIC13.12□□□□□ -0.31
Col9a2Q07643 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.12□□□□□ -0.31
Col9a2Q07643 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.12□□□□□ -0.31
Col9a2Q07643 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col9a2Q07643 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.12□□□□□ -0.31
Col9a2Q07643 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.12□□□□□ -0.31
Col9a2Q07643 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.12□□□□□ -0.31
Col9a2Q07643 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col9a2Q07643 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC13.12□□□□□ -0.31
Col9a2Q07643 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col9a2Q07643 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col9a2Q07643 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col9a2Q07643 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col9a2Q07643 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col9a2Q07643 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col9a2Q07643 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col9a2Q07643 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Col9a2Q07643 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col9a2Q07643 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.12□□□□□ -0.31
Col9a2Q07643 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col9a2Q07643 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a2Q07643 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a2Q07643 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.11□□□□□ -0.31
Col9a2Q07643 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.11□□□□□ -0.31
Col9a2Q07643 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a2Q07643 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a2Q07643 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a2Q07643 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a2Q07643 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a2Q07643 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a2Q07643 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a2Q07643 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a2Q07643 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a2Q07643 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.11□□□□□ -0.31
Col9a2Q07643 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.11□□□□□ -0.31
Col9a2Q07643 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.11□□□□□ -0.31
Col9a2Q07643 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
Col9a2Q07643 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.11□□□□□ -0.31
Col9a2Q07643 Mir7686-201ENSMUST00000200604 57 ntBASIC13.11□□□□□ -0.31
Col9a2Q07643 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.11□□□□□ -0.31
Col9a2Q07643 Gm45575-201ENSMUST00000210283 548 ntBASIC13.11□□□□□ -0.31
Col9a2Q07643 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.11□□□□□ -0.31
Col9a2Q07643 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a2Q07643 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Col9a2Q07643 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a2Q07643 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC13.11□□□□□ -0.31
Col9a2Q07643 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a2Q07643 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a2Q07643 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Col9a2Q07643 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a2Q07643 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a2Q07643 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a2Q07643 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.11□□□□□ -0.31
Col9a2Q07643 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Col9a2Q07643 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a2Q07643 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a2Q07643 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a2Q07643 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a2Q07643 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a2Q07643 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.11□□□□□ -0.31
Col9a2Q07643 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a2Q07643 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a2Q07643 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.11□□□□□ -0.31
Col9a2Q07643 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a2Q07643 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col9a2Q07643 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a2Q07643 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a2Q07643 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Col9a2Q07643 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a2Q07643 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a2Q07643 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a2Q07643 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a2Q07643 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.1□□□□□ -0.31
Col9a2Q07643 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a2Q07643 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a2Q07643 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a2Q07643 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a2Q07643 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a2Q07643 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a2Q07643 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Col9a2Q07643 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a2Q07643 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a2Q07643 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Col9a2Q07643 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col9a2Q07643 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms