Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Lig3P97386 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.31□□□□□ -0.28
Lig3P97386 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Lig3P97386 Spcs1-203ENSMUST00000226374 592 ntBASIC13.31□□□□□ -0.28
Lig3P97386 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lig3P97386 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lig3P97386 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lig3P97386 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lig3P97386 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lig3P97386 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lig3P97386 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lig3P97386 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lig3P97386 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lig3P97386 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lig3P97386 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lig3P97386 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lig3P97386 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.31□□□□□ -0.28
Lig3P97386 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.31□□□□□ -0.28
Lig3P97386 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lig3P97386 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lig3P97386 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lig3P97386 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lig3P97386 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lig3P97386 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.3□□□□□ -0.28
Lig3P97386 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC13.3□□□□□ -0.28
Lig3P97386 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Lig3P97386 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Lig3P97386 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.3□□□□□ -0.28
Lig3P97386 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.3□□□□□ -0.28
Lig3P97386 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Lig3P97386 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Lig3P97386 Gm13875-201ENSMUST00000120162 282 ntBASIC13.3□□□□□ -0.28
Lig3P97386 Gm11597-201ENSMUST00000121423 964 ntBASIC13.3□□□□□ -0.28
Lig3P97386 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.3□□□□□ -0.28
Lig3P97386 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Lig3P97386 Gm5070-201ENSMUST00000177599 862 ntBASIC13.3□□□□□ -0.28
Lig3P97386 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.3□□□□□ -0.28
Lig3P97386 Gm44651-201ENSMUST00000207343 372 ntBASIC13.3□□□□□ -0.28
Lig3P97386 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Lig3P97386 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.3□□□□□ -0.28
Lig3P97386 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13.3□□□□□ -0.28
Lig3P97386 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.3□□□□□ -0.28
Lig3P97386 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.3□□□□□ -0.28
Lig3P97386 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.3□□□□□ -0.28
Lig3P97386 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lig3P97386 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Lig3P97386 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.29□□□□□ -0.28
Lig3P97386 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.29□□□□□ -0.28
Lig3P97386 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Lig3P97386 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.29□□□□□ -0.28
Lig3P97386 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Lig3P97386 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Lig3P97386 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Lig3P97386 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.29□□□□□ -0.28
Lig3P97386 Selenot-ps-201ENSMUST00000119098 593 ntBASIC13.29□□□□□ -0.28
Lig3P97386 Gm15131-201ENSMUST00000119124 595 ntBASIC13.29□□□□□ -0.28
Lig3P97386 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms