Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SgcaP82350 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SgcaP82350 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
SgcaP82350 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcaP82350 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcaP82350 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SgcaP82350 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SgcaP82350 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcaP82350 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcaP82350 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SgcaP82350 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
SgcaP82350 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.17□□□□□ -0.78
SgcaP82350 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcaP82350 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
SgcaP82350 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcaP82350 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SgcaP82350 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.17□□□□□ -0.78
SgcaP82350 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SgcaP82350 Gm18307-201ENSMUST00000206864 949 ntBASIC10.17□□□□□ -0.78
SgcaP82350 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.17□□□□□ -0.78
SgcaP82350 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcaP82350 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcaP82350 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcaP82350 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SgcaP82350 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcaP82350 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SgcaP82350 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcaP82350 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcaP82350 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcaP82350 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcaP82350 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.17□□□□□ -0.78
SgcaP82350 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
SgcaP82350 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcaP82350 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.17□□□□□ -0.78
SgcaP82350 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcaP82350 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.17□□□□□ -0.78
SgcaP82350 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcaP82350 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcaP82350 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
SgcaP82350 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcaP82350 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcaP82350 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SgcaP82350 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
SgcaP82350 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcaP82350 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SgcaP82350 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcaP82350 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SgcaP82350 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
SgcaP82350 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcaP82350 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcaP82350 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcaP82350 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcaP82350 Gm24231-201ENSMUST00000104315 133 ntBASIC10.16□□□□□ -0.78
SgcaP82350 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SgcaP82350 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.16□□□□□ -0.78
SgcaP82350 Gm12151-201ENSMUST00000121374 290 ntBASIC10.16□□□□□ -0.78
SgcaP82350 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC10.16□□□□□ -0.78
SgcaP82350 Gm6152-201ENSMUST00000151704 340 ntBASIC10.16□□□□□ -0.78
SgcaP82350 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.16□□□□□ -0.78
SgcaP82350 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SgcaP82350 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.16□□□□□ -0.78
SgcaP82350 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC10.16□□□□□ -0.78
SgcaP82350 Gm45195-201ENSMUST00000205597 1008 ntBASIC10.16□□□□□ -0.78
SgcaP82350 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.16□□□□□ -0.78
SgcaP82350 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.16□□□□□ -0.78
SgcaP82350 Hist1h2al-201ENSMUST00000091708 339 ntBASIC10.16□□□□□ -0.78
SgcaP82350 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcaP82350 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
SgcaP82350 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcaP82350 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcaP82350 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.16□□□□□ -0.78
SgcaP82350 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
SgcaP82350 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcaP82350 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcaP82350 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
SgcaP82350 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcaP82350 AC122881.1-201ENSMUST00000225757 2695 ntBASIC10.16□□□□□ -0.78
SgcaP82350 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.16□□□□□ -0.78
SgcaP82350 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcaP82350 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcaP82350 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcaP82350 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SgcaP82350 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
SgcaP82350 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.15□□□□□ -0.78
SgcaP82350 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
SgcaP82350 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SgcaP82350 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SgcaP82350 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
SgcaP82350 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SgcaP82350 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
SgcaP82350 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SgcaP82350 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.15□□□□□ -0.78
SgcaP82350 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.15□□□□□ -0.78
SgcaP82350 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.15□□□□□ -0.78
SgcaP82350 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
SgcaP82350 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SgcaP82350 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
SgcaP82350 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SgcaP82350 Bcl2-202ENSMUST00000189999 2841 ntBASIC10.15□□□□□ -0.78
SgcaP82350 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms