Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Stra8P70278 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Stra8P70278 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Stra8P70278 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Stra8P70278 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Stra8P70278 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stra8P70278 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Stra8P70278 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Stra8P70278 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stra8P70278 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stra8P70278 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stra8P70278 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Stra8P70278 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stra8P70278 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stra8P70278 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stra8P70278 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Stra8P70278 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Stra8P70278 Gm23931-201ENSMUST00000103842 109 ntBASIC16.74■□□□□ 0.27
Stra8P70278 Gm12742-201ENSMUST00000117326 410 ntBASIC16.74■□□□□ 0.27
Stra8P70278 Trav4d-2-201ENSMUST00000120914 335 ntBASIC16.74■□□□□ 0.27
Stra8P70278 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Stra8P70278 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC16.74■□□□□ 0.27
Stra8P70278 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC16.74■□□□□ 0.27
Stra8P70278 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC16.74■□□□□ 0.27
Stra8P70278 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Stra8P70278 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC16.74■□□□□ 0.27
Stra8P70278 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC16.74■□□□□ 0.27
Stra8P70278 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC16.74■□□□□ 0.27
Stra8P70278 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.74■□□□□ 0.27
Stra8P70278 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stra8P70278 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stra8P70278 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Stra8P70278 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stra8P70278 Snora73a-201ENSMUST00000082453 205 ntBASIC16.74■□□□□ 0.27
Stra8P70278 Gm24526-201ENSMUST00000082921 158 ntBASIC16.74■□□□□ 0.27
Stra8P70278 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stra8P70278 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stra8P70278 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stra8P70278 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC16.74■□□□□ 0.27
Stra8P70278 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stra8P70278 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stra8P70278 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stra8P70278 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Stra8P70278 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stra8P70278 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Stra8P70278 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stra8P70278 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stra8P70278 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stra8P70278 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stra8P70278 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stra8P70278 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stra8P70278 AC127597.1-201ENSMUST00000225697 5711 ntBASIC16.73■□□□□ 0.27
Stra8P70278 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stra8P70278 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stra8P70278 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stra8P70278 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Stra8P70278 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stra8P70278 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stra8P70278 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Stra8P70278 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Stra8P70278 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Stra8P70278 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Stra8P70278 Gm8062-201ENSMUST00000139696 444 ntBASIC16.73■□□□□ 0.27
Stra8P70278 Gm7809-201ENSMUST00000153199 742 ntBASIC16.73■□□□□ 0.27
Stra8P70278 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stra8P70278 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Stra8P70278 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Stra8P70278 Gm37424-201ENSMUST00000191727 561 ntBASIC16.73■□□□□ 0.27
Stra8P70278 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Stra8P70278 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Stra8P70278 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stra8P70278 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stra8P70278 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stra8P70278 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Stra8P70278 Gm42913-201ENSMUST00000197936 1853 ntBASIC16.73■□□□□ 0.27
Stra8P70278 Gm42498-201ENSMUST00000199981 1372 ntBASIC16.73■□□□□ 0.27
Stra8P70278 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stra8P70278 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC16.73■□□□□ 0.27
Stra8P70278 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stra8P70278 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Stra8P70278 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stra8P70278 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Stra8P70278 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC16.73■□□□□ 0.27
Stra8P70278 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Stra8P70278 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Stra8P70278 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Stra8P70278 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Stra8P70278 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Stra8P70278 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC16.72■□□□□ 0.27
Stra8P70278 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Stra8P70278 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Stra8P70278 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Stra8P70278 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Stra8P70278 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Stra8P70278 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Stra8P70278 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC16.72■□□□□ 0.27
Stra8P70278 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC16.72■□□□□ 0.27
Stra8P70278 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC16.72■□□□□ 0.27
Stra8P70278 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC16.72■□□□□ 0.27
Stra8P70278 Gm27514-201ENSMUST00000183692 110 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms