Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Lmo4P61969 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC9.78□□□□□ -0.84
Lmo4P61969 Mir7032-201ENSMUST00000185154 79 ntBASIC9.78□□□□□ -0.84
Lmo4P61969 Gm5714-201ENSMUST00000197343 566 ntBASIC9.78□□□□□ -0.84
Lmo4P61969 Gm17831-201ENSMUST00000205579 900 ntBASIC9.78□□□□□ -0.84
Lmo4P61969 Gm44551-201ENSMUST00000208804 171 ntBASIC9.78□□□□□ -0.84
Lmo4P61969 Gm45398-201ENSMUST00000210561 165 ntBASIC9.78□□□□□ -0.84
Lmo4P61969 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC9.78□□□□□ -0.84
Lmo4P61969 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC9.78□□□□□ -0.84
Lmo4P61969 Gm6867-201ENSMUST00000219165 425 ntBASIC9.78□□□□□ -0.84
Lmo4P61969 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lmo4P61969 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lmo4P61969 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lmo4P61969 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Lmo4P61969 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lmo4P61969 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lmo4P61969 Gm13910-201ENSMUST00000121752 1428 ntBASIC9.78□□□□□ -0.84
Lmo4P61969 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lmo4P61969 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lmo4P61969 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lmo4P61969 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Lmo4P61969 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lmo4P61969 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Lmo4P61969 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lmo4P61969 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lmo4P61969 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lmo4P61969 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lmo4P61969 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lmo4P61969 Gm21998-201ENSMUST00000117552 1308 ntBASIC9.78□□□□□ -0.84
Lmo4P61969 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lmo4P61969 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Lmo4P61969 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC9.78□□□□□ -0.84
Lmo4P61969 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lmo4P61969 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lmo4P61969 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lmo4P61969 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Lmo4P61969 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Lmo4P61969 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC9.77□□□□□ -0.84
Lmo4P61969 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Lmo4P61969 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Lmo4P61969 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Lmo4P61969 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Lmo4P61969 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC9.77□□□□□ -0.84
Lmo4P61969 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC9.77□□□□□ -0.85
Lmo4P61969 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Lmo4P61969 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lmo4P61969 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lmo4P61969 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Lmo4P61969 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Lmo4P61969 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Lmo4P61969 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lmo4P61969 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC9.77□□□□□ -0.85
Lmo4P61969 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lmo4P61969 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lmo4P61969 Gm11956-201ENSMUST00000119525 512 ntBASIC9.77□□□□□ -0.85
Lmo4P61969 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lmo4P61969 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC9.77□□□□□ -0.85
Lmo4P61969 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Lmo4P61969 Gm9034-201ENSMUST00000182071 1005 ntBASIC9.77□□□□□ -0.85
Lmo4P61969 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lmo4P61969 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC9.77□□□□□ -0.85
Lmo4P61969 Gm44124-201ENSMUST00000204159 472 ntBASIC9.77□□□□□ -0.85
Lmo4P61969 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lmo4P61969 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lmo4P61969 AC159103.1-201ENSMUST00000228325 429 ntBASIC9.77□□□□□ -0.85
Lmo4P61969 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lmo4P61969 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lmo4P61969 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lmo4P61969 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lmo4P61969 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lmo4P61969 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lmo4P61969 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC9.77□□□□□ -0.85
Lmo4P61969 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lmo4P61969 Gm37348-201ENSMUST00000193104 1789 ntBASIC9.77□□□□□ -0.85
Lmo4P61969 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Lmo4P61969 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lmo4P61969 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.77□□□□□ -0.85
Lmo4P61969 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Lmo4P61969 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lmo4P61969 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Lmo4P61969 Gm9387-201ENSMUST00000098624 1320 ntBASIC9.77□□□□□ -0.85
Lmo4P61969 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC9.77□□□□□ -0.85
Lmo4P61969 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lmo4P61969 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lmo4P61969 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.76□□□□□ -0.85
Lmo4P61969 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC9.76□□□□□ -0.85
Lmo4P61969 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lmo4P61969 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lmo4P61969 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
Lmo4P61969 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lmo4P61969 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Lmo4P61969 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lmo4P61969 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lmo4P61969 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Lmo4P61969 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lmo4P61969 Gm9279-201ENSMUST00000223175 1606 ntBASIC9.76□□□□□ -0.85
Lmo4P61969 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Lmo4P61969 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC9.76□□□□□ -0.85
Lmo4P61969 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lmo4P61969 Gm14193-201ENSMUST00000105067 153 ntBASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms