Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tubgcp3P58854 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tubgcp3P58854 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Tubgcp3P58854 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Tubgcp3P58854 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Tubgcp3P58854 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Tubgcp3P58854 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Tubgcp3P58854 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Tubgcp3P58854 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.39□□□□□ -0.43
Tubgcp3P58854 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.39□□□□□ -0.43
Tubgcp3P58854 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.39□□□□□ -0.43
Tubgcp3P58854 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Gm6013-201ENSMUST00000212264 699 ntBASIC12.39□□□□□ -0.43
Tubgcp3P58854 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.39□□□□□ -0.43
Tubgcp3P58854 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Tubgcp3P58854 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.39□□□□□ -0.43
Tubgcp3P58854 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tubgcp3P58854 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Tubgcp3P58854 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubgcp3P58854 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubgcp3P58854 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubgcp3P58854 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubgcp3P58854 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.38□□□□□ -0.43
Tubgcp3P58854 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Tubgcp3P58854 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tubgcp3P58854 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.38□□□□□ -0.43
Tubgcp3P58854 Gm23912-201ENSMUST00000104687 87 ntBASIC12.38□□□□□ -0.43
Tubgcp3P58854 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubgcp3P58854 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tubgcp3P58854 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tubgcp3P58854 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.38□□□□□ -0.43
Tubgcp3P58854 Gm5186-201ENSMUST00000218781 920 ntBASIC12.38□□□□□ -0.43
Tubgcp3P58854 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.38□□□□□ -0.43
Tubgcp3P58854 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.38□□□□□ -0.43
Tubgcp3P58854 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Tubgcp3P58854 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubgcp3P58854 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubgcp3P58854 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.38□□□□□ -0.43
Tubgcp3P58854 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubgcp3P58854 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubgcp3P58854 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubgcp3P58854 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubgcp3P58854 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubgcp3P58854 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubgcp3P58854 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubgcp3P58854 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubgcp3P58854 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.37□□□□□ -0.43
Tubgcp3P58854 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tubgcp3P58854 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tubgcp3P58854 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tubgcp3P58854 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tubgcp3P58854 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tubgcp3P58854 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Tubgcp3P58854 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tubgcp3P58854 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tubgcp3P58854 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Tubgcp3P58854 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tubgcp3P58854 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Tubgcp3P58854 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tubgcp3P58854 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.37□□□□□ -0.43
Tubgcp3P58854 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.37□□□□□ -0.43
Tubgcp3P58854 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.37□□□□□ -0.43
Tubgcp3P58854 Gm18935-201ENSMUST00000212692 664 ntBASIC12.37□□□□□ -0.43
Tubgcp3P58854 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Tubgcp3P58854 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.37□□□□□ -0.43
Tubgcp3P58854 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tubgcp3P58854 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tubgcp3P58854 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tubgcp3P58854 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms