Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Lim2P56563 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Lim2P56563 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Lim2P56563 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lim2P56563 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Lim2P56563 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Lim2P56563 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.12□□□□□ -0.47
Lim2P56563 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lim2P56563 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lim2P56563 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lim2P56563 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.12□□□□□ -0.47
Lim2P56563 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lim2P56563 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lim2P56563 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lim2P56563 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.12□□□□□ -0.47
Lim2P56563 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lim2P56563 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lim2P56563 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lim2P56563 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lim2P56563 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lim2P56563 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lim2P56563 Gm13296-201ENSMUST00000117854 997 ntBASIC12.12□□□□□ -0.47
Lim2P56563 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.12□□□□□ -0.47
Lim2P56563 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.12□□□□□ -0.47
Lim2P56563 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.12□□□□□ -0.47
Lim2P56563 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lim2P56563 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.12□□□□□ -0.47
Lim2P56563 Gm35960-201ENSMUST00000202712 767 ntBASIC12.12□□□□□ -0.47
Lim2P56563 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lim2P56563 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.12□□□□□ -0.47
Lim2P56563 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lim2P56563 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lim2P56563 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lim2P56563 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lim2P56563 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lim2P56563 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lim2P56563 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lim2P56563 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lim2P56563 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lim2P56563 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lim2P56563 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lim2P56563 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lim2P56563 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lim2P56563 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lim2P56563 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lim2P56563 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.12□□□□□ -0.47
Lim2P56563 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.11□□□□□ -0.47
Lim2P56563 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lim2P56563 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lim2P56563 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.11□□□□□ -0.47
Lim2P56563 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Lim2P56563 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lim2P56563 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lim2P56563 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lim2P56563 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.11□□□□□ -0.47
Lim2P56563 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.11□□□□□ -0.47
Lim2P56563 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.11□□□□□ -0.47
Lim2P56563 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lim2P56563 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lim2P56563 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lim2P56563 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lim2P56563 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Lim2P56563 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lim2P56563 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lim2P56563 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lim2P56563 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.11□□□□□ -0.47
Lim2P56563 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lim2P56563 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.11□□□□□ -0.47
Lim2P56563 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lim2P56563 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lim2P56563 Gm15236-201ENSMUST00000117309 379 ntBASIC12.11□□□□□ -0.47
Lim2P56563 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Lim2P56563 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lim2P56563 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.11□□□□□ -0.47
Lim2P56563 Gm2383-201ENSMUST00000181461 807 ntBASIC12.11□□□□□ -0.47
Lim2P56563 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.11□□□□□ -0.47
Lim2P56563 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lim2P56563 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Lim2P56563 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.11□□□□□ -0.47
Lim2P56563 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lim2P56563 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lim2P56563 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.11□□□□□ -0.47
Lim2P56563 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lim2P56563 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Lim2P56563 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Lim2P56563 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Lim2P56563 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lim2P56563 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lim2P56563 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms