Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
NrlP54846 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
NrlP54846 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NrlP54846 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NrlP54846 Gm8566-201ENSMUST00000120174 465 ntBASIC12.92□□□□□ -0.34
NrlP54846 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.92□□□□□ -0.34
NrlP54846 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.92□□□□□ -0.34
NrlP54846 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NrlP54846 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
NrlP54846 Gm17391-201ENSMUST00000171036 126 ntBASIC12.92□□□□□ -0.34
NrlP54846 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
NrlP54846 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
NrlP54846 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
NrlP54846 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NrlP54846 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.92□□□□□ -0.34
NrlP54846 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.92□□□□□ -0.34
NrlP54846 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.92□□□□□ -0.34
NrlP54846 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.92□□□□□ -0.34
NrlP54846 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.92□□□□□ -0.34
NrlP54846 Ginm1-202ENSMUST00000065124 300 ntBASIC12.92□□□□□ -0.34
NrlP54846 Gm26035-201ENSMUST00000083065 308 ntBASIC12.92□□□□□ -0.34
NrlP54846 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.92□□□□□ -0.34
NrlP54846 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NrlP54846 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NrlP54846 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
NrlP54846 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
NrlP54846 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NrlP54846 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NrlP54846 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.92□□□□□ -0.34
NrlP54846 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NrlP54846 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NrlP54846 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.92□□□□□ -0.34
NrlP54846 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
NrlP54846 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NrlP54846 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NrlP54846 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
NrlP54846 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NrlP54846 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NrlP54846 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
NrlP54846 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.91□□□□□ -0.34
NrlP54846 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
NrlP54846 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NrlP54846 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NrlP54846 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NrlP54846 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.91□□□□□ -0.34
NrlP54846 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NrlP54846 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.91□□□□□ -0.34
NrlP54846 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
NrlP54846 Gm13888-201ENSMUST00000119148 422 ntBASIC12.91□□□□□ -0.34
NrlP54846 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.91□□□□□ -0.34
NrlP54846 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NrlP54846 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NrlP54846 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
NrlP54846 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NrlP54846 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.91□□□□□ -0.34
NrlP54846 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NrlP54846 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NrlP54846 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NrlP54846 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
NrlP54846 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NrlP54846 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NrlP54846 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NrlP54846 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.91□□□□□ -0.34
NrlP54846 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NrlP54846 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NrlP54846 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NrlP54846 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NrlP54846 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NrlP54846 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NrlP54846 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NrlP54846 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NrlP54846 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NrlP54846 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NrlP54846 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NrlP54846 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NrlP54846 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
NrlP54846 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
NrlP54846 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.9□□□□□ -0.34
NrlP54846 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NrlP54846 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NrlP54846 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NrlP54846 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NrlP54846 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
NrlP54846 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NrlP54846 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NrlP54846 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.9□□□□□ -0.34
NrlP54846 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NrlP54846 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NrlP54846 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.9□□□□□ -0.34
NrlP54846 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NrlP54846 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NrlP54846 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NrlP54846 Gm8343-201ENSMUST00000182705 994 ntBASIC12.9□□□□□ -0.34
NrlP54846 Gm8100-201ENSMUST00000182906 988 ntBASIC12.9□□□□□ -0.34
NrlP54846 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
NrlP54846 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.9□□□□□ -0.34
NrlP54846 Gm4157-201ENSMUST00000211647 679 ntBASIC12.9□□□□□ -0.34
NrlP54846 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NrlP54846 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NrlP54846 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms