Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm4879-201ENSMUST00000122190 1272 ntBASIC15.28■□□□□ 0.04
Msh6P54276 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Msh6P54276 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Msh6P54276 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC15.28■□□□□ 0.04
Msh6P54276 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh6P54276 Gm6771-201ENSMUST00000182716 1001 ntBASIC15.28■□□□□ 0.04
Msh6P54276 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC15.28■□□□□ 0.04
Msh6P54276 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh6P54276 AC121960.1-201ENSMUST00000227982 564 ntBASIC15.28■□□□□ 0.04
Msh6P54276 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh6P54276 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Msh6P54276 Gm9873-201ENSMUST00000063891 1097 ntBASIC15.28■□□□□ 0.04
Msh6P54276 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh6P54276 Mirlet7i-201ENSMUST00000083472 85 ntBASIC15.28■□□□□ 0.04
Msh6P54276 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC15.28■□□□□ 0.04
Msh6P54276 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh6P54276 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh6P54276 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh6P54276 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh6P54276 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Msh6P54276 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh6P54276 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Msh6P54276 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh6P54276 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh6P54276 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Msh6P54276 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh6P54276 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh6P54276 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh6P54276 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh6P54276 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh6P54276 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh6P54276 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Msh6P54276 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Msh6P54276 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh6P54276 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Msh6P54276 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Msh6P54276 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Msh6P54276 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Msh6P54276 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC15.27■□□□□ 0.04
Msh6P54276 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Msh6P54276 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC15.27■□□□□ 0.04
Msh6P54276 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Msh6P54276 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Msh6P54276 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Msh6P54276 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Msh6P54276 Gm14193-201ENSMUST00000105067 153 ntBASIC15.27■□□□□ 0.04
Msh6P54276 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Msh6P54276 Gm16166-201ENSMUST00000118291 787 ntBASIC15.27■□□□□ 0.04
Msh6P54276 Gm15725-201ENSMUST00000119947 1090 ntBASIC15.27■□□□□ 0.04
Msh6P54276 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC15.27■□□□□ 0.04
Msh6P54276 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC15.27■□□□□ 0.04
Msh6P54276 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Msh6P54276 Gm25951-201ENSMUST00000175330 64 ntBASIC15.27■□□□□ 0.04
Msh6P54276 Gm9192-201ENSMUST00000183221 985 ntBASIC15.27■□□□□ 0.04
Msh6P54276 Gm5714-201ENSMUST00000197343 566 ntBASIC15.27■□□□□ 0.04
Msh6P54276 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Msh6P54276 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Msh6P54276 Gm3793-201ENSMUST00000204973 672 ntBASIC15.27■□□□□ 0.04
Msh6P54276 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Msh6P54276 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Msh6P54276 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Msh6P54276 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Msh6P54276 Gm18983-201ENSMUST00000222884 2729 ntBASIC15.27■□□□□ 0.04
Msh6P54276 AC173482.6-201ENSMUST00000225889 1741 ntBASIC15.27■□□□□ 0.04
Msh6P54276 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Msh6P54276 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC15.27■□□□□ 0.03
Msh6P54276 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Msh6P54276 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Msh6P54276 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Msh6P54276 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Msh6P54276 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Msh6P54276 Gm13910-201ENSMUST00000121752 1428 ntBASIC15.27■□□□□ 0.03
Msh6P54276 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Msh6P54276 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Msh6P54276 Gm36970-201ENSMUST00000193688 1859 ntBASIC15.27■□□□□ 0.03
Msh6P54276 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Msh6P54276 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Msh6P54276 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh6P54276 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh6P54276 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Msh6P54276 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Msh6P54276 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh6P54276 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Msh6P54276 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Msh6P54276 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC15.26■□□□□ 0.03
Msh6P54276 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh6P54276 Gm23218-201ENSMUST00000158124 276 ntBASIC15.26■□□□□ 0.03
Msh6P54276 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh6P54276 Gm18159-201ENSMUST00000174516 1070 ntBASIC15.26■□□□□ 0.03
Msh6P54276 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC15.26■□□□□ 0.03
Msh6P54276 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC15.26■□□□□ 0.03
Msh6P54276 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh6P54276 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC15.26■□□□□ 0.03
Msh6P54276 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Msh6P54276 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh6P54276 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh6P54276 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh6P54276 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh6P54276 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Msh6P54276 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms