Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lbx1P52955 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.79□□□□□ -0.52
Lbx1P52955 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lbx1P52955 Mir339-201ENSMUST00000083659 96 ntBASIC11.79□□□□□ -0.52
Lbx1P52955 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lbx1P52955 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lbx1P52955 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lbx1P52955 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Lbx1P52955 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lbx1P52955 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.79□□□□□ -0.52
Lbx1P52955 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lbx1P52955 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lbx1P52955 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lbx1P52955 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lbx1P52955 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lbx1P52955 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Lbx1P52955 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lbx1P52955 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lbx1P52955 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lbx1P52955 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lbx1P52955 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lbx1P52955 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.78□□□□□ -0.52
Lbx1P52955 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lbx1P52955 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lbx1P52955 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lbx1P52955 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lbx1P52955 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lbx1P52955 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lbx1P52955 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Lbx1P52955 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lbx1P52955 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lbx1P52955 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lbx1P52955 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Lbx1P52955 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lbx1P52955 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Lbx1P52955 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lbx1P52955 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lbx1P52955 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lbx1P52955 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Lbx1P52955 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lbx1P52955 Mir432-201ENSMUST00000157230 75 ntBASIC11.78□□□□□ -0.52
Lbx1P52955 Gm20694-201ENSMUST00000176943 404 ntBASIC11.78□□□□□ -0.52
Lbx1P52955 Gm26982-201ENSMUST00000182250 1151 ntBASIC11.78□□□□□ -0.52
Lbx1P52955 Gm8824-201ENSMUST00000182962 990 ntBASIC11.78□□□□□ -0.52
Lbx1P52955 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.78□□□□□ -0.52
Lbx1P52955 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC11.78□□□□□ -0.52
Lbx1P52955 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.78□□□□□ -0.52
Lbx1P52955 Gm42816-201ENSMUST00000198433 325 ntBASIC11.78□□□□□ -0.52
Lbx1P52955 Gm43866-201ENSMUST00000203894 839 ntBASIC11.78□□□□□ -0.52
Lbx1P52955 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC11.78□□□□□ -0.52
Lbx1P52955 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lbx1P52955 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lbx1P52955 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lbx1P52955 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Lbx1P52955 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Lbx1P52955 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.78□□□□□ -0.52
Lbx1P52955 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.78□□□□□ -0.52
Lbx1P52955 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lbx1P52955 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lbx1P52955 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Lbx1P52955 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lbx1P52955 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lbx1P52955 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Lbx1P52955 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lbx1P52955 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lbx1P52955 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.78□□□□□ -0.52
Lbx1P52955 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lbx1P52955 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Lbx1P52955 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lbx1P52955 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lbx1P52955 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lbx1P52955 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.78□□□□□ -0.52
Lbx1P52955 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Lbx1P52955 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.77□□□□□ -0.52
Lbx1P52955 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Lbx1P52955 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lbx1P52955 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lbx1P52955 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lbx1P52955 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lbx1P52955 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lbx1P52955 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lbx1P52955 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lbx1P52955 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lbx1P52955 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lbx1P52955 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lbx1P52955 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lbx1P52955 Gm14921-201ENSMUST00000118643 908 ntBASIC11.77□□□□□ -0.53
Lbx1P52955 Gm15815-201ENSMUST00000120569 255 ntBASIC11.77□□□□□ -0.53
Lbx1P52955 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC11.77□□□□□ -0.53
Lbx1P52955 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.77□□□□□ -0.53
Lbx1P52955 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lbx1P52955 Gm9162-201ENSMUST00000182081 991 ntBASIC11.77□□□□□ -0.53
Lbx1P52955 Gm42430-201ENSMUST00000197209 616 ntBASIC11.77□□□□□ -0.53
Lbx1P52955 Gm43997-201ENSMUST00000203986 1005 ntBASIC11.77□□□□□ -0.53
Lbx1P52955 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lbx1P52955 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11.77□□□□□ -0.53
Lbx1P52955 Gm9797-202ENSMUST00000218003 294 ntBASIC11.77□□□□□ -0.53
Lbx1P52955 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lbx1P52955 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.77□□□□□ -0.53
Lbx1P52955 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms