Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SftpbP50405 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.39□□□□□ -0.43
SftpbP50405 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.39□□□□□ -0.43
SftpbP50405 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SftpbP50405 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SftpbP50405 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.39□□□□□ -0.43
SftpbP50405 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SftpbP50405 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SftpbP50405 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SftpbP50405 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SftpbP50405 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
SftpbP50405 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SftpbP50405 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SftpbP50405 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SftpbP50405 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SftpbP50405 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SftpbP50405 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
SftpbP50405 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.39□□□□□ -0.43
SftpbP50405 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.39□□□□□ -0.43
SftpbP50405 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.39□□□□□ -0.43
SftpbP50405 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SftpbP50405 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SftpbP50405 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.39□□□□□ -0.43
SftpbP50405 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SftpbP50405 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
SftpbP50405 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SftpbP50405 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SftpbP50405 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SftpbP50405 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.39□□□□□ -0.43
SftpbP50405 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
SftpbP50405 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SftpbP50405 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SftpbP50405 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
SftpbP50405 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SftpbP50405 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SftpbP50405 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.39□□□□□ -0.43
SftpbP50405 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SftpbP50405 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.38□□□□□ -0.43
SftpbP50405 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SftpbP50405 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
SftpbP50405 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SftpbP50405 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Gm24830-201ENSMUST00000102024 166 ntBASIC12.38□□□□□ -0.43
SftpbP50405 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.38□□□□□ -0.43
SftpbP50405 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SftpbP50405 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.38□□□□□ -0.43
SftpbP50405 Gm6266-201ENSMUST00000203844 806 ntBASIC12.38□□□□□ -0.43
SftpbP50405 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.38□□□□□ -0.43
SftpbP50405 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Gm26232-201ENSMUST00000083360 166 ntBASIC12.38□□□□□ -0.43
SftpbP50405 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.38□□□□□ -0.43
SftpbP50405 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.38□□□□□ -0.43
SftpbP50405 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SftpbP50405 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SftpbP50405 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
SftpbP50405 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SftpbP50405 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
SftpbP50405 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SftpbP50405 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.37□□□□□ -0.43
SftpbP50405 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
SftpbP50405 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SftpbP50405 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SftpbP50405 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SftpbP50405 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.37□□□□□ -0.43
SftpbP50405 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SftpbP50405 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.37□□□□□ -0.43
SftpbP50405 Gm14999-201ENSMUST00000121039 624 ntBASIC12.37□□□□□ -0.43
SftpbP50405 Gm11424-201ENSMUST00000121929 829 ntBASIC12.37□□□□□ -0.43
SftpbP50405 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
SftpbP50405 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.37□□□□□ -0.43
SftpbP50405 Gm16379-201ENSMUST00000161469 348 ntBASIC12.37□□□□□ -0.43
SftpbP50405 Gm17150-201ENSMUST00000165577 381 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms