Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Gm17794-201ENSMUST00000220252 955 ntBASIC10.04□□□□□ -0.8
Nkx2-1P50220 AC162801.1-201ENSMUST00000220612 198 ntBASIC10.04□□□□□ -0.8
Nkx2-1P50220 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Nkx2-1P50220 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.04□□□□□ -0.8
Nkx2-1P50220 Gm9816-201ENSMUST00000122292 1414 ntBASIC10.04□□□□□ -0.8
Nkx2-1P50220 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.04□□□□□ -0.8
Nkx2-1P50220 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-1P50220 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC10.04□□□□□ -0.8
Nkx2-1P50220 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-1P50220 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.04□□□□□ -0.8
Nkx2-1P50220 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.04□□□□□ -0.8
Nkx2-1P50220 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-1P50220 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.04□□□□□ -0.8
Nkx2-1P50220 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.03□□□□□ -0.8
Nkx2-1P50220 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Gm11637-201ENSMUST00000120601 592 ntBASIC10.03□□□□□ -0.8
Nkx2-1P50220 Gm16479-201ENSMUST00000121706 932 ntBASIC10.03□□□□□ -0.8
Nkx2-1P50220 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.03□□□□□ -0.8
Nkx2-1P50220 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Gm45384-201ENSMUST00000210451 277 ntBASIC10.03□□□□□ -0.8
Nkx2-1P50220 Gm9908-201ENSMUST00000211534 448 ntBASIC10.03□□□□□ -0.8
Nkx2-1P50220 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.03□□□□□ -0.8
Nkx2-1P50220 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.03□□□□□ -0.8
Nkx2-1P50220 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.03□□□□□ -0.8
Nkx2-1P50220 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Gm44775-201ENSMUST00000207266 1456 ntBASIC10.03□□□□□ -0.8
Nkx2-1P50220 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-1P50220 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Nkx2-1P50220 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Nkx2-1P50220 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Nkx2-1P50220 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Nkx2-1P50220 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Nkx2-1P50220 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.8
Nkx2-1P50220 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Nkx2-1P50220 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Nkx2-1P50220 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Gm8213-201ENSMUST00000118191 441 ntBASIC10.02□□□□□ -0.81
Nkx2-1P50220 Mir1894-201ENSMUST00000122802 81 ntBASIC10.02□□□□□ -0.81
Nkx2-1P50220 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-1P50220 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.02□□□□□ -0.81
Nkx2-1P50220 Gm9002-201ENSMUST00000178437 499 ntBASIC10.02□□□□□ -0.81
Nkx2-1P50220 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms