Protein–RNA interactions for Protein: P47963

Rpl13, 60S ribosomal protein L13, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13P47963 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpl13P47963 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Rpl13P47963 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpl13P47963 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rpl13P47963 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpl13P47963 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.28□□□□□ -0.28
Rpl13P47963 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Rpl13P47963 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpl13P47963 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rpl13P47963 Gm12036-201ENSMUST00000120008 530 ntBASIC13.28□□□□□ -0.28
Rpl13P47963 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rpl13P47963 Gm3096-201ENSMUST00000185770 364 ntBASIC13.28□□□□□ -0.28
Rpl13P47963 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.28□□□□□ -0.28
Rpl13P47963 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.28□□□□□ -0.28
Rpl13P47963 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.28□□□□□ -0.28
Rpl13P47963 Gm31256-201ENSMUST00000194705 506 ntBASIC13.28□□□□□ -0.28
Rpl13P47963 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.28□□□□□ -0.28
Rpl13P47963 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpl13P47963 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpl13P47963 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpl13P47963 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rpl13P47963 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpl13P47963 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rpl13P47963 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpl13P47963 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpl13P47963 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.28□□□□□ -0.28
Rpl13P47963 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpl13P47963 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.28□□□□□ -0.28
Rpl13P47963 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpl13P47963 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rpl13P47963 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.28□□□□□ -0.28
Rpl13P47963 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Rpl13P47963 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rpl13P47963 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpl13P47963 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rpl13P47963 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rpl13P47963 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rpl13P47963 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Rpl13P47963 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rpl13P47963 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rpl13P47963 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rpl13P47963 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rpl13P47963 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rpl13P47963 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.27□□□□□ -0.29
Rpl13P47963 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.27□□□□□ -0.29
Rpl13P47963 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpl13P47963 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Rpl13P47963 Gm38266-201ENSMUST00000194931 421 ntBASIC13.27□□□□□ -0.29
Rpl13P47963 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpl13P47963 Gm8712-201ENSMUST00000221090 701 ntBASIC13.27□□□□□ -0.29
Rpl13P47963 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.27□□□□□ -0.29
Rpl13P47963 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpl13P47963 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpl13P47963 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpl13P47963 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rpl13P47963 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rpl13P47963 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.27□□□□□ -0.29
Rpl13P47963 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpl13P47963 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.27□□□□□ -0.29
Rpl13P47963 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpl13P47963 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpl13P47963 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.27□□□□□ -0.29
Rpl13P47963 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rpl13P47963 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpl13P47963 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpl13P47963 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpl13P47963 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.27□□□□□ -0.29
Rpl13P47963 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.27□□□□□ -0.29
Rpl13P47963 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Rpl13P47963 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpl13P47963 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpl13P47963 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpl13P47963 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.27□□□□□ -0.29
Rpl13P47963 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rpl13P47963 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Rpl13P47963 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpl13P47963 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rpl13P47963 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpl13P47963 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Rpl13P47963 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.27□□□□□ -0.29
Rpl13P47963 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rpl13P47963 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpl13P47963 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpl13P47963 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpl13P47963 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpl13P47963 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.26□□□□□ -0.29
Rpl13P47963 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpl13P47963 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Rpl13P47963 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.26□□□□□ -0.29
Rpl13P47963 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpl13P47963 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpl13P47963 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Rpl13P47963 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rpl13P47963 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Rpl13P47963 Gm14247-201ENSMUST00000120950 237 ntBASIC13.26□□□□□ -0.29
Rpl13P47963 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Rpl13P47963 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rpl13P47963 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rpl13P47963 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rpl13P47963 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms