Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.77□□□□□ -0.53
Rph3aP47708 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rph3aP47708 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rph3aP47708 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rph3aP47708 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Rph3aP47708 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Rph3aP47708 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.77□□□□□ -0.53
Rph3aP47708 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rph3aP47708 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rph3aP47708 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rph3aP47708 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.77□□□□□ -0.53
Rph3aP47708 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rph3aP47708 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rph3aP47708 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rph3aP47708 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rph3aP47708 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rph3aP47708 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Rph3aP47708 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.76□□□□□ -0.53
Rph3aP47708 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Rph3aP47708 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Rph3aP47708 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.76□□□□□ -0.53
Rph3aP47708 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.76□□□□□ -0.53
Rph3aP47708 Mir8109-201ENSMUST00000184375 117 ntBASIC11.76□□□□□ -0.53
Rph3aP47708 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.76□□□□□ -0.53
Rph3aP47708 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Rph3aP47708 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Rph3aP47708 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.76□□□□□ -0.53
Rph3aP47708 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Rph3aP47708 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Rph3aP47708 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Rph3aP47708 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Rph3aP47708 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rph3aP47708 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Rph3aP47708 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Rph3aP47708 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Rph3aP47708 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.75□□□□□ -0.53
Rph3aP47708 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rph3aP47708 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Rph3aP47708 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.75□□□□□ -0.53
Rph3aP47708 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rph3aP47708 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rph3aP47708 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Rph3aP47708 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rph3aP47708 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.75□□□□□ -0.53
Rph3aP47708 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rph3aP47708 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Rph3aP47708 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rph3aP47708 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Rph3aP47708 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rph3aP47708 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Rph3aP47708 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rph3aP47708 Gm14726-201ENSMUST00000120623 896 ntBASIC11.75□□□□□ -0.53
Rph3aP47708 Gm14832-201ENSMUST00000121289 322 ntBASIC11.75□□□□□ -0.53
Rph3aP47708 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.75□□□□□ -0.53
Rph3aP47708 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.75□□□□□ -0.53
Rph3aP47708 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rph3aP47708 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.75□□□□□ -0.53
Rph3aP47708 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rph3aP47708 Gm6334-201ENSMUST00000207083 228 ntBASIC11.75□□□□□ -0.53
Rph3aP47708 Gm45331-201ENSMUST00000209868 554 ntBASIC11.75□□□□□ -0.53
Rph3aP47708 Gm45865-201ENSMUST00000211815 945 ntBASIC11.75□□□□□ -0.53
Rph3aP47708 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.75□□□□□ -0.53
Rph3aP47708 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.75□□□□□ -0.53
Rph3aP47708 Cts7-204ENSMUST00000225321 1257 ntBASIC11.75□□□□□ -0.53
Rph3aP47708 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.75□□□□□ -0.53
Rph3aP47708 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rph3aP47708 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rph3aP47708 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms