Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf4P43488 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf4P43488 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Tnfsf4P43488 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf4P43488 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf4P43488 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf4P43488 Gm24934-201ENSMUST00000103764 111 ntBASIC11.7□□□□□ -0.54
Tnfsf4P43488 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.7□□□□□ -0.54
Tnfsf4P43488 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf4P43488 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf4P43488 Gm12058-201ENSMUST00000118614 437 ntBASIC11.7□□□□□ -0.54
Tnfsf4P43488 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Tnfsf4P43488 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.7□□□□□ -0.54
Tnfsf4P43488 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf4P43488 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Tnfsf4P43488 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.7□□□□□ -0.54
Tnfsf4P43488 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.7□□□□□ -0.54
Tnfsf4P43488 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf4P43488 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.7□□□□□ -0.54
Tnfsf4P43488 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf4P43488 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.7□□□□□ -0.54
Tnfsf4P43488 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.7□□□□□ -0.54
Tnfsf4P43488 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.7□□□□□ -0.54
Tnfsf4P43488 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.7□□□□□ -0.54
Tnfsf4P43488 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf4P43488 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Tnfsf4P43488 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf4P43488 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Tnfsf4P43488 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.7□□□□□ -0.54
Tnfsf4P43488 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.7□□□□□ -0.54
Tnfsf4P43488 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfsf4P43488 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.7□□□□□ -0.54
Tnfsf4P43488 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf4P43488 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.69□□□□□ -0.54
Tnfsf4P43488 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf4P43488 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf4P43488 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.69□□□□□ -0.54
Tnfsf4P43488 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf4P43488 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf4P43488 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.69□□□□□ -0.54
Tnfsf4P43488 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf4P43488 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf4P43488 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Tnfsf4P43488 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.69□□□□□ -0.54
Tnfsf4P43488 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf4P43488 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.69□□□□□ -0.54
Tnfsf4P43488 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf4P43488 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf4P43488 Gm13570-201ENSMUST00000140763 309 ntBASIC11.69□□□□□ -0.54
Tnfsf4P43488 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf4P43488 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf4P43488 Gm37201-201ENSMUST00000191845 523 ntBASIC11.69□□□□□ -0.54
Tnfsf4P43488 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Tnfsf4P43488 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf4P43488 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf4P43488 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf4P43488 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf4P43488 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf4P43488 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Tnfsf4P43488 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Tnfsf4P43488 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.69□□□□□ -0.54
Tnfsf4P43488 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf4P43488 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf4P43488 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf4P43488 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfsf4P43488 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.68□□□□□ -0.54
Tnfsf4P43488 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfsf4P43488 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.68□□□□□ -0.54
Tnfsf4P43488 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.68□□□□□ -0.54
Tnfsf4P43488 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfsf4P43488 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfsf4P43488 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms