Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc11P31313 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc11P31313 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc11P31313 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc11P31313 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.8□□□□□ -0.52
Hoxc11P31313 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Hoxc11P31313 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.8□□□□□ -0.52
Hoxc11P31313 Gm12566-201ENSMUST00000121479 359 ntBASIC11.8□□□□□ -0.52
Hoxc11P31313 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc11P31313 Mir6979-201ENSMUST00000183927 56 ntBASIC11.8□□□□□ -0.52
Hoxc11P31313 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc11P31313 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.8□□□□□ -0.52
Hoxc11P31313 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxc11P31313 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxc11P31313 Gm18304-201ENSMUST00000189162 546 ntBASIC11.8□□□□□ -0.52
Hoxc11P31313 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc11P31313 Gm17812-201ENSMUST00000204935 318 ntBASIC11.8□□□□□ -0.52
Hoxc11P31313 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc11P31313 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxc11P31313 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc11P31313 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc11P31313 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Hoxc11P31313 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc11P31313 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc11P31313 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hoxc11P31313 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc11P31313 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc11P31313 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc11P31313 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc11P31313 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc11P31313 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc11P31313 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc11P31313 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxc11P31313 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.8□□□□□ -0.52
Hoxc11P31313 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hoxc11P31313 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc11P31313 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc11P31313 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc11P31313 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxc11P31313 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.79□□□□□ -0.52
Hoxc11P31313 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc11P31313 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc11P31313 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc11P31313 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc11P31313 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc11P31313 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc11P31313 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc11P31313 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc11P31313 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc11P31313 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Hoxc11P31313 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.79□□□□□ -0.52
Hoxc11P31313 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.79□□□□□ -0.52
Hoxc11P31313 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.79□□□□□ -0.52
Hoxc11P31313 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.79□□□□□ -0.52
Hoxc11P31313 Gm24749-201ENSMUST00000157838 343 ntBASIC11.79□□□□□ -0.52
Hoxc11P31313 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Hoxc11P31313 Gm37986-201ENSMUST00000193285 383 ntBASIC11.79□□□□□ -0.52
Hoxc11P31313 Gm42937-201ENSMUST00000197360 752 ntBASIC11.79□□□□□ -0.52
Hoxc11P31313 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.79□□□□□ -0.52
Hoxc11P31313 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.79□□□□□ -0.52
Hoxc11P31313 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc11P31313 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Hoxc11P31313 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc11P31313 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Hoxc11P31313 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.79□□□□□ -0.52
Hoxc11P31313 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc11P31313 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc11P31313 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc11P31313 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc11P31313 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc11P31313 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hoxc11P31313 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.79□□□□□ -0.52
Hoxc11P31313 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc11P31313 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc11P31313 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc11P31313 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc11P31313 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Hoxc11P31313 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc11P31313 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc11P31313 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Hoxc11P31313 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc11P31313 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc11P31313 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxc11P31313 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc11P31313 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc11P31313 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Hoxc11P31313 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc11P31313 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc11P31313 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc11P31313 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.78□□□□□ -0.52
Hoxc11P31313 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Hoxc11P31313 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hoxc11P31313 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc11P31313 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc11P31313 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.78□□□□□ -0.52
Hoxc11P31313 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc11P31313 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc11P31313 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hoxc11P31313 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxc11P31313 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms