Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Mmp3P28862 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp3P28862 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp3P28862 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp3P28862 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp3P28862 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Mmp3P28862 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Mmp3P28862 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp3P28862 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp3P28862 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp3P28862 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp3P28862 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp3P28862 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp3P28862 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Mmp3P28862 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp3P28862 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp3P28862 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp3P28862 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.94□□□□□ -0.34
Mmp3P28862 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp3P28862 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Mmp3P28862 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp3P28862 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Mmp3P28862 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp3P28862 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp3P28862 Gm13263-201ENSMUST00000121271 838 ntBASIC12.94□□□□□ -0.34
Mmp3P28862 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Mmp3P28862 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp3P28862 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.94□□□□□ -0.34
Mmp3P28862 Gm19287-201ENSMUST00000203190 358 ntBASIC12.94□□□□□ -0.34
Mmp3P28862 Gm44124-201ENSMUST00000204159 472 ntBASIC12.94□□□□□ -0.34
Mmp3P28862 Gm43916-201ENSMUST00000205062 967 ntBASIC12.94□□□□□ -0.34
Mmp3P28862 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp3P28862 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp3P28862 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp3P28862 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp3P28862 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp3P28862 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp3P28862 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp3P28862 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp3P28862 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.94□□□□□ -0.34
Mmp3P28862 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.94□□□□□ -0.34
Mmp3P28862 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Mmp3P28862 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Mmp3P28862 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.94□□□□□ -0.34
Mmp3P28862 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp3P28862 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.94□□□□□ -0.34
Mmp3P28862 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.94□□□□□ -0.34
Mmp3P28862 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp3P28862 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.94□□□□□ -0.34
Mmp3P28862 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp3P28862 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp3P28862 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.94□□□□□ -0.34
Mmp3P28862 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Mmp3P28862 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp3P28862 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp3P28862 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp3P28862 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.93□□□□□ -0.34
Mmp3P28862 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp3P28862 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Mmp3P28862 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp3P28862 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.93□□□□□ -0.34
Mmp3P28862 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp3P28862 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Mmp3P28862 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp3P28862 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.93□□□□□ -0.34
Mmp3P28862 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp3P28862 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Mmp3P28862 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp3P28862 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp3P28862 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp3P28862 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.93□□□□□ -0.34
Mmp3P28862 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Mmp3P28862 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp3P28862 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.93□□□□□ -0.34
Mmp3P28862 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.93□□□□□ -0.34
Mmp3P28862 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp3P28862 Gm8815-201ENSMUST00000173809 620 ntBASIC12.93□□□□□ -0.34
Mmp3P28862 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp3P28862 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.93□□□□□ -0.34
Mmp3P28862 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp3P28862 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Mmp3P28862 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp3P28862 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp3P28862 Gm10179-201ENSMUST00000086233 688 ntBASIC12.93□□□□□ -0.34
Mmp3P28862 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp3P28862 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Mmp3P28862 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp3P28862 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Mmp3P28862 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp3P28862 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp3P28862 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp3P28862 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp3P28862 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp3P28862 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Mmp3P28862 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp3P28862 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Mmp3P28862 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Mmp3P28862 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Mmp3P28862 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Mmp3P28862 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms