Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6aP27664 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6aP27664 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6aP27664 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6aP27664 Gm18056-201ENSMUST00000207670 568 ntBASIC14.03□□□□□ -0.16
Pde6aP27664 Gm18061-201ENSMUST00000208350 562 ntBASIC14.03□□□□□ -0.16
Pde6aP27664 Gm18063-201ENSMUST00000208529 568 ntBASIC14.03□□□□□ -0.16
Pde6aP27664 Gm18052-201ENSMUST00000208750 559 ntBASIC14.03□□□□□ -0.16
Pde6aP27664 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.03□□□□□ -0.16
Pde6aP27664 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.03□□□□□ -0.16
Pde6aP27664 AC153929.1-201ENSMUST00000219009 303 ntBASIC14.03□□□□□ -0.16
Pde6aP27664 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.03□□□□□ -0.16
Pde6aP27664 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6aP27664 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6aP27664 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6aP27664 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6aP27664 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6aP27664 Gm10152-201ENSMUST00000193475 1344 ntBASIC14.03□□□□□ -0.16
Pde6aP27664 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6aP27664 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.03□□□□□ -0.16
Pde6aP27664 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6aP27664 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6aP27664 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.03□□□□□ -0.16
Pde6aP27664 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6aP27664 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6aP27664 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6aP27664 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6aP27664 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6aP27664 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6aP27664 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6aP27664 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pde6aP27664 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.03□□□□□ -0.16
Pde6aP27664 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pde6aP27664 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pde6aP27664 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Pde6aP27664 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Pde6aP27664 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.02□□□□□ -0.16
Pde6aP27664 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6aP27664 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6aP27664 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6aP27664 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.02□□□□□ -0.16
Pde6aP27664 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6aP27664 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6aP27664 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6aP27664 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.02□□□□□ -0.16
Pde6aP27664 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6aP27664 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6aP27664 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6aP27664 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6aP27664 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.02□□□□□ -0.16
Pde6aP27664 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pde6aP27664 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6aP27664 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Pde6aP27664 Gm22133-201ENSMUST00000102082 109 ntBASIC14.02□□□□□ -0.17
Pde6aP27664 Gm26286-201ENSMUST00000104166 134 ntBASIC14.02□□□□□ -0.17
Pde6aP27664 Gm12380-201ENSMUST00000119012 544 ntBASIC14.02□□□□□ -0.17
Pde6aP27664 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.02□□□□□ -0.17
Pde6aP27664 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Pde6aP27664 Gm27627-201ENSMUST00000183644 150 ntBASIC14.02□□□□□ -0.17
Pde6aP27664 Gm2260-201ENSMUST00000184965 657 ntBASIC14.02□□□□□ -0.17
Pde6aP27664 Gm29615-201ENSMUST00000185371 697 ntBASIC14.02□□□□□ -0.17
Pde6aP27664 Gm28224-201ENSMUST00000186078 697 ntBASIC14.02□□□□□ -0.17
Pde6aP27664 Gm29001-201ENSMUST00000186177 697 ntBASIC14.02□□□□□ -0.17
Pde6aP27664 Gm28292-201ENSMUST00000186593 697 ntBASIC14.02□□□□□ -0.17
Pde6aP27664 Gm28101-201ENSMUST00000187608 697 ntBASIC14.02□□□□□ -0.17
Pde6aP27664 Gm29076-201ENSMUST00000187689 697 ntBASIC14.02□□□□□ -0.17
Pde6aP27664 Gm28302-201ENSMUST00000187931 697 ntBASIC14.02□□□□□ -0.17
Pde6aP27664 Gm28646-201ENSMUST00000188220 697 ntBASIC14.02□□□□□ -0.17
Pde6aP27664 Gm28205-201ENSMUST00000189177 697 ntBASIC14.02□□□□□ -0.17
Pde6aP27664 Gm29032-201ENSMUST00000189797 697 ntBASIC14.02□□□□□ -0.17
Pde6aP27664 Gm28695-201ENSMUST00000190300 697 ntBASIC14.02□□□□□ -0.17
Pde6aP27664 Gm37448-201ENSMUST00000192795 697 ntBASIC14.02□□□□□ -0.17
Pde6aP27664 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Pde6aP27664 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6aP27664 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6aP27664 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6aP27664 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6aP27664 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Pde6aP27664 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6aP27664 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6aP27664 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6aP27664 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6aP27664 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Pde6aP27664 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6aP27664 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6aP27664 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Pde6aP27664 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6aP27664 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pde6aP27664 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6aP27664 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6aP27664 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6aP27664 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6aP27664 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6aP27664 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6aP27664 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6aP27664 Gm14017-201ENSMUST00000121934 386 ntBASIC14.01□□□□□ -0.17
Pde6aP27664 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6aP27664 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.01□□□□□ -0.17
Pde6aP27664 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.01□□□□□ -0.17
Pde6aP27664 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms