Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h2P0C090 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.39□□□□□ -0.43
Rc3h2P0C090 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h2P0C090 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.39□□□□□ -0.43
Rc3h2P0C090 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h2P0C090 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rc3h2P0C090 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.39□□□□□ -0.43
Rc3h2P0C090 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.38□□□□□ -0.43
Rc3h2P0C090 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.38□□□□□ -0.43
Rc3h2P0C090 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.38□□□□□ -0.43
Rc3h2P0C090 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.38□□□□□ -0.43
Rc3h2P0C090 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.38□□□□□ -0.43
Rc3h2P0C090 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h2P0C090 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Gm12501-201ENSMUST00000119163 529 ntBASIC12.38□□□□□ -0.43
Rc3h2P0C090 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.38□□□□□ -0.43
Rc3h2P0C090 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Gm8343-201ENSMUST00000182705 994 ntBASIC12.38□□□□□ -0.43
Rc3h2P0C090 Gm9211-201ENSMUST00000182882 975 ntBASIC12.38□□□□□ -0.43
Rc3h2P0C090 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rc3h2P0C090 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rc3h2P0C090 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.37□□□□□ -0.43
Rc3h2P0C090 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rc3h2P0C090 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rc3h2P0C090 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rc3h2P0C090 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rc3h2P0C090 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rc3h2P0C090 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rc3h2P0C090 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rc3h2P0C090 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rc3h2P0C090 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Rc3h2P0C090 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rc3h2P0C090 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rc3h2P0C090 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Rc3h2P0C090 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rc3h2P0C090 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rc3h2P0C090 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rc3h2P0C090 Gm12165-201ENSMUST00000117047 342 ntBASIC12.37□□□□□ -0.43
Rc3h2P0C090 Gm12857-201ENSMUST00000117678 592 ntBASIC12.37□□□□□ -0.43
Rc3h2P0C090 Gm13045-201ENSMUST00000119019 712 ntBASIC12.37□□□□□ -0.43
Rc3h2P0C090 Gm11941-201ENSMUST00000119904 610 ntBASIC12.37□□□□□ -0.43
Rc3h2P0C090 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rc3h2P0C090 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rc3h2P0C090 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.37□□□□□ -0.43
Rc3h2P0C090 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rc3h2P0C090 Gm19353-201ENSMUST00000184561 445 ntBASIC12.37□□□□□ -0.43
Rc3h2P0C090 Gm5733-201ENSMUST00000190232 939 ntBASIC12.37□□□□□ -0.43
Rc3h2P0C090 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.37□□□□□ -0.43
Rc3h2P0C090 Gm4482-201ENSMUST00000200876 742 ntBASIC12.37□□□□□ -0.43
Rc3h2P0C090 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rc3h2P0C090 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rc3h2P0C090 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.37□□□□□ -0.43
Rc3h2P0C090 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.37□□□□□ -0.43
Rc3h2P0C090 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rc3h2P0C090 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rc3h2P0C090 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms