Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
ApoeP08226 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.48□□□□□ -0.57
ApoeP08226 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ApoeP08226 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
ApoeP08226 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.47□□□□□ -0.57
ApoeP08226 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ApoeP08226 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ApoeP08226 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.47□□□□□ -0.57
ApoeP08226 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.47□□□□□ -0.57
ApoeP08226 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
ApoeP08226 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ApoeP08226 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ApoeP08226 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ApoeP08226 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.47□□□□□ -0.57
ApoeP08226 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.47□□□□□ -0.57
ApoeP08226 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ApoeP08226 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ApoeP08226 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ApoeP08226 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
ApoeP08226 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ApoeP08226 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.47□□□□□ -0.57
ApoeP08226 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ApoeP08226 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
ApoeP08226 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
ApoeP08226 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.47□□□□□ -0.57
ApoeP08226 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ApoeP08226 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.47□□□□□ -0.57
ApoeP08226 Gm45930-201ENSMUST00000221330 292 ntBASIC11.47□□□□□ -0.57
ApoeP08226 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.47□□□□□ -0.57
ApoeP08226 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ApoeP08226 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ApoeP08226 Gm10012-201ENSMUST00000078252 192 ntBASIC11.47□□□□□ -0.57
ApoeP08226 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
ApoeP08226 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
ApoeP08226 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ApoeP08226 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.47□□□□□ -0.57
ApoeP08226 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
ApoeP08226 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ApoeP08226 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ApoeP08226 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ApoeP08226 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ApoeP08226 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ApoeP08226 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.47□□□□□ -0.57
ApoeP08226 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ApoeP08226 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
ApoeP08226 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ApoeP08226 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
ApoeP08226 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.46□□□□□ -0.57
ApoeP08226 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ApoeP08226 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
ApoeP08226 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
ApoeP08226 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ApoeP08226 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ApoeP08226 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
ApoeP08226 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
ApoeP08226 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
ApoeP08226 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
ApoeP08226 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ApoeP08226 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ApoeP08226 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.46□□□□□ -0.57
ApoeP08226 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
ApoeP08226 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ApoeP08226 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
ApoeP08226 Gm7488-201ENSMUST00000117148 684 ntBASIC11.46□□□□□ -0.57
ApoeP08226 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
ApoeP08226 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ApoeP08226 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
ApoeP08226 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ApoeP08226 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.46□□□□□ -0.57
ApoeP08226 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ApoeP08226 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ApoeP08226 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ApoeP08226 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ApoeP08226 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
ApoeP08226 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ApoeP08226 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ApoeP08226 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.46□□□□□ -0.57
ApoeP08226 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ApoeP08226 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
ApoeP08226 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
ApoeP08226 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ApoeP08226 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ApoeP08226 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.46□□□□□ -0.58
ApoeP08226 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
ApoeP08226 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ApoeP08226 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ApoeP08226 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
ApoeP08226 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ApoeP08226 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ApoeP08226 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
ApoeP08226 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
ApoeP08226 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ApoeP08226 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ApoeP08226 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ApoeP08226 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ApoeP08226 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
ApoeP08226 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms