Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
CfdP03953 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CfdP03953 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.11□□□□□ -0.79
CfdP03953 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CfdP03953 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
CfdP03953 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CfdP03953 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CfdP03953 Gm3365-201ENSMUST00000216296 1480 ntBASIC10.11□□□□□ -0.79
CfdP03953 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.11□□□□□ -0.79
CfdP03953 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CfdP03953 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.11□□□□□ -0.79
CfdP03953 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.11□□□□□ -0.79
CfdP03953 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
CfdP03953 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CfdP03953 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
CfdP03953 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
CfdP03953 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.11□□□□□ -0.79
CfdP03953 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
CfdP03953 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
CfdP03953 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.11□□□□□ -0.79
CfdP03953 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
CfdP03953 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.11□□□□□ -0.79
CfdP03953 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CfdP03953 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC10.11□□□□□ -0.79
CfdP03953 Gm8213-201ENSMUST00000118191 441 ntBASIC10.11□□□□□ -0.79
CfdP03953 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.11□□□□□ -0.79
CfdP03953 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC10.11□□□□□ -0.79
CfdP03953 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CfdP03953 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC10.11□□□□□ -0.79
CfdP03953 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC10.11□□□□□ -0.79
CfdP03953 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.11□□□□□ -0.79
CfdP03953 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.11□□□□□ -0.79
CfdP03953 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.11□□□□□ -0.79
CfdP03953 Gm4768-201ENSMUST00000206199 686 ntBASIC10.11□□□□□ -0.79
CfdP03953 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.11□□□□□ -0.79
CfdP03953 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.11□□□□□ -0.79
CfdP03953 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CfdP03953 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
CfdP03953 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CfdP03953 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
CfdP03953 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
CfdP03953 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CfdP03953 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CfdP03953 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CfdP03953 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
CfdP03953 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CfdP03953 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CfdP03953 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CfdP03953 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.11□□□□□ -0.79
CfdP03953 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CfdP03953 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CfdP03953 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.11□□□□□ -0.79
CfdP03953 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CfdP03953 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CfdP03953 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
CfdP03953 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.1□□□□□ -0.79
CfdP03953 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
CfdP03953 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
CfdP03953 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
CfdP03953 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Gm24830-201ENSMUST00000102024 166 ntBASIC10.1□□□□□ -0.79
CfdP03953 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
CfdP03953 Gm13369-201ENSMUST00000119442 987 ntBASIC10.1□□□□□ -0.79
CfdP03953 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.1□□□□□ -0.79
CfdP03953 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC10.1□□□□□ -0.79
CfdP03953 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Mir6392-201ENSMUST00000184924 108 ntBASIC10.1□□□□□ -0.79
CfdP03953 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC10.1□□□□□ -0.79
CfdP03953 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC10.1□□□□□ -0.79
CfdP03953 Gm18624-201ENSMUST00000220966 658 ntBASIC10.1□□□□□ -0.79
CfdP03953 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.1□□□□□ -0.79
CfdP03953 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
CfdP03953 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Gm26232-201ENSMUST00000083360 166 ntBASIC10.1□□□□□ -0.79
CfdP03953 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.1□□□□□ -0.79
CfdP03953 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
CfdP03953 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms